Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0663 ATGGCTGTGGCGTACTTCAATCTTCTGCTTCACTACCTTTTCGCGTTCCATCTCTGTTATTTCCTCGCCACCGCTATTACAAACCACAACGAAGAAAACCCCGAAAAGAAACTCCTCCTTTCTTTCAAAACCAGTCTCCAAAACCCCCAGCTTCTTGCTTCGTGGAATTCCTCAACCCCACACTGCAGCTGGGTTGGTGTCACTTGCCAACTCGACCGAGTTACCTCACTCTCTCTTCCAACTCGGTACCTCAATGGCCCACTCTCTTCTTCCCTCTTCTCCCTTACTTGCCTCACCGTCCTCAACTTGTCCTTTAACGCACTCTTCGGTGAAATTCCTCCACAGATAGCCAATCTGACAAACTTGAAGGAGCTCAGTCTTTGTCATAATCAGTTTTCTGGGGACATTCCGGACGAGCTTGGCGGTTTGACTCAGCTAAAAACTCTCGAACTAAGCTCCAACTCGTTCACTGGGAAAATACCACCGGAGCTGGGGTCACTGACACAACTCCGGACGCTCGACCTCTCCGGTAATGCCCTCACCGGAACCGTGCCGGAAACTATCGGAAACCTGAGACAACTTATGTTCCTTGACCTCAGCAACAATCTTCTCTCAGGTTCTCTCCCCGTAACTCTTTTCACAGGAACTCTGTCTTTGATTTCTCTGGACGTTTCAAACAACTCATTTTCTGGTACACTACCACCGGAAATTCGTAACTTGAGGAATATCACTGCCCTTTACATTGGCGTAAATAAATTTTCCGGCAGGCTGCCTTCTGAGATTGGCGAACTTCCGAGGCTCGAAGTGCTTTTAGCACCTAATTGTTTTATCGAAGGTCCGTTGCCTGAAGAAATGTCGAAATTGAAGTCATTGAGTAAACTTGACCTTTCTTACAACCCCTTGAGGTGTTCGATCCCAAAGTTTATTGGGAAGCTGCAGAGTTTGAGAATACTGGACCTTTCTTTCGCGCAGCTCAATGGGTCCATACCGTCTGAGCTTGGGAGTTGTAAGAACTTGTGGTCTGTGATGCTCTCTTTCAACTCGCTTTCTGGGTCATTGCCAGAGGAGCTTTCTGAGCTCCCCATAATGACATTTATAGCTGAAAAGAATCAGTTTCATGGACCTTTGCCTGCTTGGCTTGGAAAGTGGAATCATATTGATTCTCTTTTGCTTTCTGAGAATCGATTTTCCGGGAAAATTCCTCCTGAGCTTGGGAATTGCTCTTCACTGGAGCAACTTAGTCTGAGGAGTAACTTTCTGACAGGTCCCATACCTGAGGAGCTCTGTTATGCTACTTCCCTTGTGGAGATTGATCTTGATGATAACTCCCTTTCTGGTACAATTGAGAAAGCATTTGTTAATTGTCGGAACCTTACTCAGTTGGTTTTGATGAACAATCAGATCGTTGGTTCCTTACCTCAGTACCTTTCAGAGATTCCTTTGATGGTGCTTGATCTCGACTCAAACAATTTCACTGGAAGCATACCTTCAAGCCTGTGGAATTCATCAACACTGATGGAATTTTCTGCTGCTAATAACCGTTTGGAGGGCTTTCTTCCTGCCGAGATTGGGAATGCAATTATTCTAGAGAGGCTTGTTCTTAGTAACAATCTACTGAAGGGTATTATACCTAAGGAAATTGGAAGTCTCACCAATCTATCTGTTCTTAATTTGAACGGAAATCTACTTGAAGGGAATATTCCAACTGAGCTTGGAGACTGCATTTCGCTGACAACTCTGGACCTTGGAAATAATCAGCTAAATGGGTCTATTCCTGTTAAATTAGTTGAACTAAGCCAATTACAATGTTTGGTTCTTTCTCACAATAATCTATCAGGGTCCATTCCTAGAAAATCATCTTCATATTTCAGTCGACTTACTGTCCCTGATTTGAGCTTTGTTCAACACCTTGGAGTATTCGATCTATCACACAATAGATTGTCTGGGACTATACCTCATGAATTGGGGAGCTGTGTTGTGGTAGTGGATCTTTTGCTCAACAACAACATGCTTTCTGGGAGTATTCCAGGTTCACTATTTCGTCTGACAAATCTCACAACTTTGGATTTGTCTGGTAACTTGTTGTCAGGTTCCATTCCACAAGAACTTGGAGATTCTCTCAAGCTACAAGGATTATATCTGGGACATAATCAGCTTACAGGCAACATCCCTGGAAGTATAGGAAAATTGAGTACTTTGGTGAAGCTGAATTTGACAGGAAACAGGTTGTCTGGTTCAATTCCAATTAATTTTGGGAATCTGAAAGAGCTATCTCACTTGGATTTGAGCTGTAATGAGCTTAGTGGCCATCTTCCATCCTCTCTAAGAGGTGTTCAAAGTCTTGTTGGGCTTTATGTGCAGCAGAATAGGCTTTCTGGGCAAGTAGTGGAGATCTTCTCTAACTTCATGATATGGAGAATTGAGACAATGAACTTAAGTGATAATTACTTCAGTGGAGATTTGCCAAGATCTTTAGGAAACCTTTCCTACTTGACAAATTTGGATCTTCATGGAAATATGTTTACCGGAGAGATTCCTTCAGAACTTGGGATTCTAGTGCAACTGGAGTATTTTGATGTTTCAGGCAACAGGTTATATGGGAAGATTCCTGAAACCATTTGCAGCTTAGTAAGTCTGAAGTACCTTGATTTATCTCAAAACAGATTGGAAGGGCTTATACCCAGAAGTGGTATTTGCCAAAACCTGTCCAGAGTTAGATTCACTGGGAACAAAAATCTTTGTGGGCGGAATTTGGGTATAGATTGTCCCATCAAAAGCATTGGTAGATTTGCACTGTTTAATGCATGGCAGCTTGTGGGAATTGCCATTACAATCACACTAATGACCCTAAGCATTGCTTTTGTTCTACACAGATGGATACGCAGGAGGCAAAATGATCCAGAGGAACTCGAGGAACACAAACTAAACAATTATGTGAATCAAAACCTTTATTTCTTGAGCAGTAGCAGATCAAAGGAACCTCTGAGTATAAACGTCGCAATGTTTGAGCAGCCTCTTCTGAAGCTAACTTTGGAGGATGTACTTGAAGCCACTGGTAACTTCAGCAAGTCAAACATAATTGGAGATGGAGGTTTTGGAACTGTGTACAAGGCCAGTTTGCCTAATGGCAAAACAGTTGCTGTGAAGAAGCTGAGTGAAGCTAAAACGCAGGGTCATCGCGAGTTCATGGCTGAAATGGAAACTTTAGGCAAGGTGAAGCACCAAAATCTTGTTCCATTGCTAGGATATTGCTCCATCGGTGAGGAGAAACTCCTTGTTTATGAGTACATGGTGAATGGAAGCTTAGATCTTTGGTTGAGAAATAGGACTACTGGGGCCCTTGAAGTCCTCAACTGGAACAAAAGGTACAAAATTGCCACTGGTGCAGCCAGAGGATTAGCTTTCCTCCATCATGGGTTCATTCCCCACATCATTCACAGGGACATTAAAGCTAGCAACATTTTGCTGAATGGAGAATTTGAGCCTAAAGTTGCAGACTTTGGACTTGCTAGACTTATTAGTGCCTGTGAGACCCATATCACGACTGATATTGCTGGAACATTTGGGTACATTCCACCAGAGTATGGGCAAAGCGGGAGGTCCACAACAAAAGGAGATGTCTATAGTTTCGGGGTCATTTTGCTTGAATTGGTGAGTGGAAAGGAGCCAACTGGACCTGAATTTAAGGACATTGAAGGCGGGAATTTGGTTGGTTGGGTGTTTCTAAAGATCAAGAAGGGGCAGGCTGCTGATGTTCTTGATCCTACAGTTCTGGATGCAGATTCAAAGCAGATGATGCTTCAAATGCTGCAGATTGCTTGTGTGTGCCTTTCTGATAATCCTGCAAACAGGCCTACTATGCTTCAAGTGCTTAAGTTTTTGAAAGGGATTAAAGGAGAGTAG 3903 0.4315 MAVAYFNLLLHYLFAFHLCYFLATAITNHNEENPEKKLLLSFKTSLQNPQLLASWNSSTPHCSWVGVTCQLDRVTSLSLPTRYLNGPLSSSLFSLTCLTVLNLSFNALFGEIPPQIANLTNLKELSLCHNQFSGDIPDELGGLTQLKTLELSSNSFTGKIPPELGSLTQLRTLDLSGNALTGTVPETIGNLRQLMFLDLSNNLLSGSLPVTLFTGTLSLISLDVSNNSFSGTLPPEIRNLRNITALYIGVNKFSGRLPSEIGELPRLEVLLAPNCFIEGPLPEEMSKLKSLSKLDLSYNPLRCSIPKFIGKLQSLRILDLSFAQLNGSIPSELGSCKNLWSVMLSFNSLSGSLPEELSELPIMTFIAEKNQFHGPLPAWLGKWNHIDSLLLSENRFSGKIPPELGNCSSLEQLSLRSNFLTGPIPEELCYATSLVEIDLDDNSLSGTIEKAFVNCRNLTQLVLMNNQIVGSLPQYLSEIPLMVLDLDSNNFTGSIPSSLWNSSTLMEFSAANNRLEGFLPAEIGNAIILERLVLSNNLLKGIIPKEIGSLTNLSVLNLNGNLLEGNIPTELGDCISLTTLDLGNNQLNGSIPVKLVELSQLQCLVLSHNNLSGSIPRKSSSYFSRLTVPDLSFVQHLGVFDLSHNRLSGTIPHELGSCVVVVDLLLNNNMLSGSIPGSLFRLTNLTTLDLSGNLLSGSIPQELGDSLKLQGLYLGHNQLTGNIPGSIGKLSTLVKLNLTGNRLSGSIPINFGNLKELSHLDLSCNELSGHLPSSLRGVQSLVGLYVQQNRLSGQVVEIFSNFMIWRIETMNLSDNYFSGDLPRSLGNLSYLTNLDLHGNMFTGEIPSELGILVQLEYFDVSGNRLYGKIPETICSLVSLKYLDLSQNRLEGLIPRSGICQNLSRVRFTGNKNLCGRNLGIDCPIKSIGRFALFNAWQLVGIAITITLMTLSIAFVLHRWIRRRQNDPEELEEHKLNNYVNQNLYFLSSSRSKEPLSINVAMFEQPLLKLTLEDVLEATGNFSKSNIIGDGGFGTVYKASLPNGKTVAVKKLSEAKTQGHREFMAEMETLGKVKHQNLVPLLGYCSIGEEKLLVYEYMVNGSLDLWLRNRTTGALEVLNWNKRYKIATGAARGLAFLHHGFIPHIIHRDIKASNILLNGEFEPKVADFGLARLISACETHITTDIAGTFGYIPPEYGQSGRSTTKGDVYSFGVILLELVSGKEPTGPEFKDIEGGNLVGWVFLKIKKGQAADVLDPTVLDADSKQMMLQMLQIACVCLSDNPANRPTMLQVLKFLKGIKGE 1300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0663 1300 Pfam Leucine rich repeat N-terminal domain 33 69 IPR013210 -
Bisa01g0663 1300 Pfam Protein tyrosine and serine/threonine kinase 1024 1294 IPR001245 GO:0004672|GO:0006468
Bisa01g0663 1300 SUPERFAMILY L domain-like 304 396 - -
Bisa01g0663 1300 SUPERFAMILY L domain-like 625 917 - -
Bisa01g0663 1300 SUPERFAMILY L domain-like 37 301 - -
Bisa01g0663 1300 SMART LRR_typ_2 634 658 IPR003591 -
Bisa01g0663 1300 SMART LRR_typ_2 191 215 IPR003591 -
Bisa01g0663 1300 SMART LRR_typ_2 119 143 IPR003591 -
Bisa01g0663 1300 SMART LRR_typ_2 167 190 IPR003591 -
Bisa01g0663 1300 SMART LRR_typ_2 876 899 IPR003591 -
Bisa01g0663 1300 SMART LRR_typ_2 598 622 IPR003591 -
Bisa01g0663 1300 SMART LRR_typ_2 730 753 IPR003591 -
Bisa01g0663 1300 SMART LRR_typ_2 682 706 IPR003591 -
Bisa01g0663 1300 SMART LRR_typ_2 550 574 IPR003591 -
Bisa01g0663 1300 SMART LRR_typ_2 754 777 IPR003591 -
Bisa01g0663 1300 SMART LRR_typ_2 288 310 IPR003591 -
Bisa01g0663 1300 SMART LRR_typ_2 312 336 IPR003591 -
Bisa01g0663 1300 SMART LRR_typ_2 95 118 IPR003591 -
Bisa01g0663 1300 Gene3D Ribonuclease Inhibitor 365 623 IPR032675 -
Bisa01g0663 1300 Gene3D Ribonuclease Inhibitor 624 924 IPR032675 -
Bisa01g0663 1300 Gene3D Ribonuclease Inhibitor 83 215 IPR032675 -
Bisa01g0663 1300 Gene3D Ribonuclease Inhibitor 216 364 IPR032675 -
Bisa01g0663 1300 Gene3D Ribonuclease Inhibitor 24 82 IPR032675 -
Bisa01g0663 1300 Pfam Leucine Rich Repeat 878 896 IPR001611 GO:0005515
Bisa01g0663 1300 Gene3D Transferase(Phosphotransferase) domain 1 1097 1300 - -
Bisa01g0663 1300 PRINTS Leucine-rich repeat signature 170 183 - -
Bisa01g0663 1300 PRINTS Leucine-rich repeat signature 682 695 - -
Bisa01g0663 1300 SUPERFAMILY L domain-like 368 632 - -
Bisa01g0663 1300 ProSitePatterns Protein kinases ATP-binding region signature. 1027 1050 IPR017441 GO:0005524
Bisa01g0663 1300 SMART serkin_6 1021 1294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g0663 1300 SUPERFAMILY Protein kinase-like (PK-like) 1002 1294 IPR011009 -
Bisa01g0663 1300 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1144 1156 IPR008271 GO:0004672|GO:0006468
Bisa01g0663 1300 ProSiteProfiles Protein kinase domain profile. 1021 1300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g0663 1300 FunFam Leucine-rich repeat receptor protein kinase EMS1 364 623 - -
Bisa01g0663 1300 SMART LRR_sd22_2 167 193 - -
Bisa01g0663 1300 SMART LRR_sd22_2 95 121 - -
Bisa01g0663 1300 SMART LRR_sd22_2 876 894 - -
Bisa01g0663 1300 SMART LRR_sd22_2 754 780 - -
Bisa01g0663 1300 SMART LRR_sd22_2 682 705 - -
Bisa01g0663 1300 Pfam Leucine rich repeat 98 155 IPR001611 GO:0005515
Bisa01g0663 1300 Pfam Leucine rich repeat 732 791 IPR001611 GO:0005515
Bisa01g0663 1300 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 682 1295 - -
Bisa01g0663 1300 FunFam Leucine-rich repeat receptor-like kinase 34 142 - -
Bisa01g0663 1300 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 630 926 - -
Bisa01g0663 1300 FunFam LRR receptor-like serine/threonine-protein kinase 143 215 - -
Bisa01g0663 1300 FunFam leucine-rich repeat receptor protein kinase EMS1 216 363 - -
Bisa01g0663 1300 Gene3D Phosphorylase Kinase; domain 1 983 1096 - -
Bisa01g0663 1300 FunFam serine/threonine-protein kinase BRI1-like 2 982 1096 - -
Bisa01g0663 1300 FunFam serine/threonine-protein kinase BRI1-like 2 1097 1300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0663 Bisa-ChrBisa01 10205602 10209504 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0663 35 1297 Receptor kinase-like Gene Family AT5G07280 58.944 0.0 1404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Bisa01g0663 PK_Tyr_Ser-Thr 3.2e-45 CL0016