Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0662 ATGGCTCCGCCGCCGGTGGAACATAGCGGTGAGTCCACGGCTGGTGATCCGCTGAGATCTATTCCCACGCCGTTTCTCACCAAGACGTTTCAGCTCGTCGACGATCACACCATCAACGATGTGATTTCCTGGAACGAAGACGGATCCACTTTCATCGTTTGGAATCCTACCGTTTTCGCCAGGGATTTGCTTCCGAAATATTTTAAACACAATAACTTCTCCAGCTTCGTTCGCCAACTCAACACCTATGGATTCAGAAAGGTTGTGCCTGACCGATGGGAATTCTCGAACGAGTACTTCCGCAGAGGCGAGAAACGGCTTCTGTGCGAAATACAACGACGGAAGATAGCGTTGCCTGCGACGACACCGACGGCAGGGGCGGCGGATGGGGCTGCTGCAACAGTGGCAGTTCCGGCGCCTTTGCCGTTGACCGCGATACCGACGGCGATGCCGATTATATCGCCGTCAAACTCAGACGAGGAGCAAGTGATTTCGTCCAATTCGTCGTCCTCCAAAGCTCCGGCTGAGCTCATAGACGAGAACGAGAGGTTGCGGAAAGAGAACGTCCAGCTGACGAAGGAATTAACGGAGATGAGATCCATGTGTAACAATATATTCTCTCTGATGTCGAATTACGCAAATAACCAACCTGATAACGTTGAACAAGGCAGAGAGACCGTGAAACCTCTCGATTTGATGCCCGGGAAGCAGAGCTCCGGTGAAGAGGAGCCGGCGCTGTCAGCGGTGGATATGGCGGTGGAGGAGATAAATCCAAAGCTTTTTGGGGTGGCGATCGGTGCTAAAAGAGCGAGAGAAGCCGGAGGAGGAGGAGGAGCGGATGAAGATACACTGTTAAGCTTACATCAGCCAGGGCCTGCTGAAGTGAAATCAGAGCCGTTGGATTGTCAGAACCATCGAGAGAATCAGGAGACACCGTGGCTTAATCAATGCCACAGAGCCAATCAGAGAGTAATTAATTAA 981 0.5199 MAPPPVEHSGESTAGDPLRSIPTPFLTKTFQLVDDHTINDVISWNEDGSTFIVWNPTVFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDRWEFSNEYFRRGEKRLLCEIQRRKIALPATTPTAGAADGAAATVAVPAPLPLTAIPTAMPIISPSNSDEEQVISSNSSSSKAPAELIDENERLRKENVQLTKELTEMRSMCNNIFSLMSNYANNQPDNVEQGRETVKPLDLMPGKQSSGEEEPALSAVDMAVEEINPKLFGVAIGAKRAREAGGGGGADEDTLLSLHQPGPAEVKSEPLDCQNHRENQETPWLNQCHRANQRVIN 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0662 326 ProSitePatterns HSF-type DNA-binding domain signature. 64 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa01g0662 326 PRINTS Heat shock factor (HSF) domain signature 63 75 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa01g0662 326 PRINTS Heat shock factor (HSF) domain signature 25 48 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa01g0662 326 PRINTS Heat shock factor (HSF) domain signature 76 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa01g0662 326 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 12 242 IPR027725 -
Bisa01g0662 326 MobiDBLite consensus disorder prediction 1 20 - -
Bisa01g0662 326 Pfam HSF-type DNA-binding 25 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa01g0662 326 MobiDBLite consensus disorder prediction 271 298 - -
Bisa01g0662 326 SMART hsfneu3 21 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa01g0662 326 Coils Coil 181 201 - -
Bisa01g0662 326 Gene3D - 19 115 IPR036388 -
Bisa01g0662 326 FunFam Heat stress transcription factor B-4 18 115 - -
Bisa01g0662 326 SUPERFAMILY "Winged helix" DNA-binding domain 22 114 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0662 Bisa-ChrBisa01 10173111 10174181 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0662 1 326 HSF AT5G62020 47.536 5.86e-96 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Bisa01g0662 HSF_DNA-bind 4.1e-32 CL0123