Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bisa01g0652 | ATGGTGGGTCCTGAGCTCATATATGAGTTTCTATCTAATTACTGCAACTGCTTTGTCAATTTAAATACTCCGAGGTGTCACCGAAAGCAACCCAATCGAATAGAAGAGGAAGAAGATGCAATCGAGAGCTATGGTCGGACAGAGGAGCAGACAACAACGGCGGAGAGGACAGCGGCGGAGATGAAGCCGGAGGAGACAAAGCCGGAAAACAACATAGAACTTTCTTGTAAGAGACAAGAAAACGGCGTCGCTTGCCGCTGCTCGTCTTCGACCTGCGAGGGAGCGTCTGGTTTCGAATCCAAAGTGTTCACCCTCTTGGTCCTTCAGCTTTCGCCTCTTGTAGAAAGTCTCACAACGTCTGCCTTTCTCTCTCTCACAAACTCGCCCGCAATCATGGGTGTGAAGCATTTGTGGGATATCCTCGAATGCTGCAAGAAAACAGTTCCACTTCACCATCTCCAGAACAAGAGGGTATGCATAGATCTCTCGTGTTGGATGGTGCAACTTCAGAATGTGAGCAAATCACACTCGTGTGTGAAGGAGAAGGTCTACCTCAGAGGTCTCTTTCATCGCCTTAGAGCACTCATTTCTTTGAATTGCAGCCTAATTTTTGTTACAGATGGATCAATTCCTGCTATTAAATTATCAACTTATAGGCAACGCCTAAACTCTGGAAAAGAGGTAGCACAAAATGAAGGTGACTTACAGAAAGTATCTTCATTACGAAGAAACATGGGATCTGAGTTTTCGTGCATGATAAAAGAGGCAAACGTGTTGGGGATGGCTCTAGGCATCCCTTGTCTGAATGGAATTGAAGAAGCTGAAGCTCAGTGTGCATTATTGAACTCCGAATTATTATGTGATGGATGTTTCAGTTCAGATTCAGATATCTTTCTTTTTGGTGCAAGGACAGTGTATAGGGATATCTGCCTTGGAGATGGCGGATATGTTGTTTGTTACGAGATGGTAGACATTGAAAGAAAGCTTGGATTTGGAAGGGACTCATTGATTGCTCTTGCCTTACTTCTTGGTAGTGACTACAGTCAAGGAGTTTATGGTATTGGTCCAGAGTCAGCTTGTCAGATAGTTAAATCAACTGGGGACAAATTTGTGCTTCAAAAAATTGCTTCTGAAGGACTTGAATGTCTGAAAAGACTAAAAGGTGCAAAGAAACTGGGGCAAGTTCTCAAGAGCAGCAACAAAGAAAATATATTGAACCATGACATGGCATTGAGTCATGGAGGTGAGAGTAATTCACAAAGAGATTATCACTTTTTGCAAGTTATCAATGCTTATATGAAGCCAAAGTGCCACCCAGCAGATTCTGATATTGTGATGAGGGTTCTTGCTCAATATCCATTTCAACGCAGTAAACTCCATCAGATATGTGCTATATTCTTTCAGTGGCCTCCAGAGAAAACAGATGAATATATCCTACCAAAGATTGCTGAAAGAGATTTACGGCGATTTGCCAATTTACGTCTAACTTCATCAGAAGCAGGAATGAATCTTCCTTTACATGAGATCCCTGTTAAGTGTCCTGTATCAGAAATCATGAAGGGCCGCAAAGTTCAAGGAAGAGAATGCTATGAGGTGTCATGGCATGAAATAGATGGACTTAGAACTTCAATAGTATCAGCAGATCTTTTGGAAAGTGCCTGTCCTGAGAAGATTTTAGAGTTCAAAGAGAGAAAAGTCGAATTGAAGAAACAAAATATTCAGAAAAGAAGGCCAAAGAAAACTGAAGCTACTTCTTCTATGGCTGAACTTGATCTGAAGCTGAAGAATCTGTTGCTGGATGTAAATCCTGGTGACCGTGCCAATCACAATGCCTCTAATTTGTCAGAACATGTATTTCAAGATACAACTGCTATGGCTGAAGCTAATCTGAATAACCGAGACTTGTTTCATATGTCACATGATGAAGAACATGTTGGGTTGAATCAGAATATTAGCCACATATCTAACCATCAGGCTGATTCCAGCAGAGCTGAGACTGATGTCATTGATCTGCTGAGCCCTTCACCTAAACAATCCTATGCTCCCTCAAAATGTCGACAATCTAATGGTCAACATATTGAGGTGATTAATTTGAGTGACTCGGAAAATGACACGTCACCTGAACATACGAGGAAAGCAAAGGAGTTGAGATTGTTCTTAGCAAAGCATTAG | 2172 | 0.418 | MVGPELIYEFLSNYCNCFVNLNTPRCHRKQPNRIEEEEDAIESYGRTEEQTTTAERTAAEMKPEETKPENNIELSCKRQENGVACRCSSSTCEGASGFESKVFTLLVLQLSPLVESLTTSAFLSLTNSPAIMGVKHLWDILECCKKTVPLHHLQNKRVCIDLSCWMVQLQNVSKSHSCVKEKVYLRGLFHRLRALISLNCSLIFVTDGSIPAIKLSTYRQRLNSGKEVAQNEGDLQKVSSLRRNMGSEFSCMIKEANVLGMALGIPCLNGIEEAEAQCALLNSELLCDGCFSSDSDIFLFGARTVYRDICLGDGGYVVCYEMVDIERKLGFGRDSLIALALLLGSDYSQGVYGIGPESACQIVKSTGDKFVLQKIASEGLECLKRLKGAKKLGQVLKSSNKENILNHDMALSHGGESNSQRDYHFLQVINAYMKPKCHPADSDIVMRVLAQYPFQRSKLHQICAIFFQWPPEKTDEYILPKIAERDLRRFANLRLTSSEAGMNLPLHEIPVKCPVSEIMKGRKVQGRECYEVSWHEIDGLRTSIVSADLLESACPEKILEFKERKVELKKQNIQKRRPKKTEATSSMAELDLKLKNLLLDVNPGDRANHNASNLSEHVFQDTTAMAEANLNNRDLFHMSHDEEHVGLNQNISHISNHQADSSRAETDVIDLLSPSPKQSYAPSKCRQSNGQHIEVINLSDSENDTSPEHTRKAKELRLFLAKH | 723 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bisa01g0652 | 723 | Pfam | XPG I-region | 264 | 346 | IPR006086 | GO:0004518 | |
Bisa01g0652 | 723 | Pfam | XPG N-terminal domain | 132 | 223 | IPR006085 | GO:0004518 | |
Bisa01g0652 | 723 | SMART | HhH_4 | 333 | 366 | IPR008918 | GO:0003677|GO:0003824 | |
Bisa01g0652 | 723 | SUPERFAMILY | 5' to 3' exonuclease, C-terminal subdomain | 331 | 493 | IPR036279 | - | |
Bisa01g0652 | 723 | FunFam | flap endonuclease GEN-like 2 | 133 | 330 | - | - | |
Bisa01g0652 | 723 | MobiDBLite | consensus disorder prediction | 34 | 70 | - | - | |
Bisa01g0652 | 723 | PRINTS | Xeroderma pigmentosum group G/yeast RAD superfamily signature | 202 | 221 | IPR006084 | - | |
Bisa01g0652 | 723 | PRINTS | Xeroderma pigmentosum group G/yeast RAD superfamily signature | 260 | 277 | IPR006084 | - | |
Bisa01g0652 | 723 | PRINTS | Xeroderma pigmentosum group G/yeast RAD superfamily signature | 281 | 301 | IPR006084 | - | |
Bisa01g0652 | 723 | PRINTS | Xeroderma pigmentosum group G/yeast RAD superfamily signature | 155 | 169 | IPR006084 | - | |
Bisa01g0652 | 723 | PRINTS | Xeroderma pigmentosum group G/yeast RAD superfamily signature | 336 | 351 | IPR006084 | - | |
Bisa01g0652 | 723 | CDD | H3TH_XPG-like | 334 | 377 | - | - | |
Bisa01g0652 | 723 | PANTHER | FLAP ENDONUCLEASE FAMILY MEMBER | 132 | 696 | IPR006084 | - | |
Bisa01g0652 | 723 | FunFam | Flap endonuclease GEN-like 1 | 331 | 389 | - | - | |
Bisa01g0652 | 723 | Gene3D | - | 133 | 330 | - | - | |
Bisa01g0652 | 723 | SMART | xpgn3 | 132 | 228 | IPR006085 | GO:0004518 | |
Bisa01g0652 | 723 | CDD | PIN_GEN1 | 133 | 329 | - | - | |
Bisa01g0652 | 723 | Gene3D | - | 332 | 392 | - | - | |
Bisa01g0652 | 723 | SUPERFAMILY | PIN domain-like | 133 | 346 | IPR029060 | - | |
Bisa01g0652 | 723 | SMART | xpgineu | 261 | 331 | IPR006086 | GO:0004518 | |
Bisa01g0652 | 723 | MobiDBLite | consensus disorder prediction | 53 | 70 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bisa01g0652 | Bisa-ChrBisa01 | 10046027 | 10065136 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bisa01g0652 | 132 | 367 | Core DNA Replication Machinery Family | AT5G26680 | 24.419 | 3.18e-12 | 67.4 |