Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0649 ATGGGAAGGCAGCCCATTGATAAGGCAAAGCCAAAACACAGGAAGGGGCTGTGGTCTCCTGAAGAAGACAATAAGCTCAGAAACCACATCCTTACCCATGGCCATGGCTGCTGGAGCTCTGTTCCCATTAAGGCTGGGTTGCAGAGGAACGGGAAAAGCTGCAGATTAAGGTGGATCAACTATCTAAGGCCAGGATTAAAAAGAGGGATGTTCAGCAAACAAGAGGAAGAGACAATTTTGACCCTTCACCACGTGTTAGGCAACAAGTGGTCTCAGATAGCACAGCATTTACCAGGAAGGACAGACAATGAGATAAAGAACCATTGGCATTCATATTTGAAAAAGAAAGTGGCCAAAGCAGAGGCAATGCAGTGTCATCATAAACAAGTGCAATACAAAAGCTCAAGCTCAGATACCTTTGATTCTTCTTCACCCTCAAACCACAAACCTGCCATTCCAAACTCTGATCTCTCCTCTTCTTCACAAAACTATAACTTAATCAAAGGGACTCCTCAGAGCTCCTTGCCAAAACTTCTATTTGCTGAGTGGCTTTCACTAGATCATGTGCCTGCAAGTTCTGGTGACGACTCTTTTGCTCTCAGAAATGGAGGACACTTTTATCAGTACTCAGATTTTCAAGAATCTGCAATGCATGGAGGCTATGGTGGAGAGCTTCATAATGGTCTAACTCTAAACCCCGATGGAGCTTCTGGAATGTTCAATTCACAGCTCAGATTTTCAAATCAAATGGAGGGAAATGGGTTCATCCATTACCCAAGTTTCAGCATGAGCAATGATATGATGTACATATGA 813 0.4354 MGRQPIDKAKPKHRKGLWSPEEDNKLRNHILTHGHGCWSSVPIKAGLQRNGKSCRLRWINYLRPGLKRGMFSKQEEETILTLHHVLGNKWSQIAQHLPGRTDNEIKNHWHSYLKKKVAKAEAMQCHHKQVQYKSSSSDTFDSSSPSNHKPAIPNSDLSSSSQNYNLIKGTPQSSLPKLLFAEWLSLDHVPASSGDDSFALRNGGHFYQYSDFQESAMHGGYGGELHNGLTLNPDGASGMFNSQLRFSNQMEGNGFIHYPSFSMSNDMMYI 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0649 270 FunFam MYB transcription factor 70 142 - -
Bisa01g0649 270 CDD SANT 18 62 IPR001005 -
Bisa01g0649 270 CDD SANT 71 113 IPR001005 -
Bisa01g0649 270 SMART sant 14 64 IPR001005 -
Bisa01g0649 270 SMART sant 67 115 IPR001005 -
Bisa01g0649 270 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 62 IPR017930 -
Bisa01g0649 270 MobiDBLite consensus disorder prediction 128 165 - -
Bisa01g0649 270 Gene3D - 15 67 - -
Bisa01g0649 270 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Bisa01g0649 270 MobiDBLite consensus disorder prediction 1 21 - -
Bisa01g0649 270 SUPERFAMILY Homeodomain-like 12 109 IPR009057 -
Bisa01g0649 270 PANTHER MYB DOMAIN PROTEIN 55 1 170 - -
Bisa01g0649 270 FunFam MYB transcription factor 12 68 - -
Bisa01g0649 270 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Bisa01g0649 270 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
Bisa01g0649 270 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Bisa01g0649 270 Gene3D - 70 141 - -
Bisa01g0649 270 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0649 Bisa-ChrBisa01 9960884 9963597 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0649 8 193 MYB Transcription Factor Family AT3G48920 51.579 4.51e-60 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa01g0649 Myb_DNA-binding 3.6e-11 CL0123