Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0647 ATGGGGAGGGCACCATGTTGTGATGAAGATGGAGGGAGAAAAGGAGCTTGGACTCCTGAAGAAGATGAAGGCTTAGTTCAGTATATCAAGAAGCATGGCTGTCGTAGTTGGAGTACACTCCCCAAGCACGCAGCTTTTCTTGAGCGCACACACATACGCACTCCTCTTCCTCTCTGGGAGCTCATTGTGCTCATCATAAGCTGCAGAAGAAAACAATCATGTCTATCCTCTTATGCTGAACCAAATGAAATGAACTCTTTAAAATGA 267 0.4532 MGRAPCCDEDGGRKGAWTPEEDEGLVQYIKKHGCRSWSTLPKHAAFLERTHIRTPLPLWELIVLIISCRRKQSCLSSYAEPNEMNSLK 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0647 88 SUPERFAMILY Homeodomain-like 12 52 IPR009057 -
Bisa01g0647 88 Gene3D - 8 77 - -
Bisa01g0647 88 ProSiteProfiles Myb-like domain profile. 9 50 IPR001005 -
Bisa01g0647 88 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 45 - -
Bisa01g0647 88 CDD SANT 16 43 IPR001005 -
Bisa01g0647 88 Pfam Myb-like DNA-binding domain 14 45 IPR001005 -
Bisa01g0647 88 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 13 50 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0647 Bisa-ChrBisa01 9955015 9955772 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0647 1 44 MYB Transcription Factor Family AT1G34670 65.909 1.62e-16 70.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bisa01g0647 Myb_DNA-binding 3.8e-08 CL0123