LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa01g0646	ATGTGTTTCCATGGACTTTCTCTTCTTGTCCTTTCTGGCTTCTGCCAATCGGTCCAACTCAGAAGAGTCCAAAGACCAAAGGAAACTGATGCAAAAGGCTCAACCTTTGAGCCCTTGTGCGAAACACCCGGAAACCGTAACGTTAAATTTTTCAGAAATTTTCAAGGAAAATGTCAACTTGAAGTTCAAACTTCCACATCATCGACGTTTCTGAGACTCGCTCTCAATTTCTCTTCCATAACGGGATTTGTTTGTTTTAGTGGGTTTCAGAGAGTCTTTCTTCTGCCTGTTGAGTGTTCGACCGATTGCTTCAATGAAAGTTCTGTCGTTTTCTTTCTGGTCAAATCATATGAGGGTTGCTTGTTTTCTTTTTCATTTGTTTTGATATGTATGTATGACTATTTTCGTTTTGCTTTTTATGTTGCCATTAAGAACCCCGGTCATTGCCTTACAGGGCATGCACGTATTAAATGCAATTCTGGTCCTTTACGCCGCCCGATTGTACTATATATACGCATTTATAGCTCTGTTTCTTTCCATTATGACTCCATTGGGCTTTCCTTCTGCAACACTCTTCTTCCTTTCCCACTCTTTCTTCTTTCTTCTCTCTGTGTCTATGACCCTGTGACTGAGGTCATTGAAAAAGAAGAGCATACTGTAGTCCCAAATCAATCTGGTAATGAGAGGGAGAAGATGGGGAGGGCACCGTGTTGTGATAAAGATGGAGTGAGAAAAGGAGCTTGGACTCCTGAAGAAGACGAAGTGTTAGTTCAGTACATCAAGAAGCATGGCTGTGGTAGTTGGCGTACACTCCCCAAGCACGCAGGTCTCCTTCGATGTGGAAAAAGCTGCCGACTTCGTTGGATAAACTATCTTCGCCCTGACATAAAGCGTGGCCCTTTTACTGCTGAAGAAGAAACTACTATTATTCAACTTCATGGCATGCTCGGCAACAGGTGGGCTGCTATAGCATCTCAATTACCAGGAAGAACAGACAATGAAATTAAAAACTATTGGAACACCCATCTAAAGAAGCGCCTCCTTCGTTCAGGTCATTCCCCCATGGCACAAAAGCCCTCTTTTGGTCCTGATGAAACTGATATAAAATCTGGATCTCCTGCCATACGTCACATGGTACAGTGGGAAAAAGCTAGAGTTGAGGCAGAATCAAGGTTGTCAATGGAATTGGAGTCCTCATTGCCTAATTCTTGTTCATCAACTAACACACACCCTGATTGCTTTCTTCAACTTTGGCATTCCGAGGTGGGACAATCATTTCGCACGATCATGGAGAAGGAAGCAGTGAGTCAAAGCTCTGCATCCCAAGCAAGCAGTGCCTTTGCTGACATGGCTGAAGAACAAGCAAGCAGCTCTAAACCTAAGCTTGGAGATGGCAATGGCTTTGCTGGGTCAGAGTCAGGTTTTTATGAATTTATCGATAGTTCTGATACTGCATTAAAGCTTCTGCTAGATATGCTTGATGGCAATATAGGATTTCCAGAAGAATTGGGATAG	1515	0.4304	MCFHGLSLLVLSGFCQSVQLRRVQRPKETDAKGSTFEPLCETPGNRNVKFFRNFQGKCQLEVQTSTSSTFLRLALNFSSITGFVCFSGFQRVFLLPVECSTDCFNESSVVFFLVKSYEGCLFSFSFVLICMYDYFRFAFYVAIKNPGHCLTGHARIKCNSGPLRRPIVLYIRIYSSVSFHYDSIGLSFCNTLLPFPLFLLSSLCVYDPVTEVIEKEEHTVVPNQSGNEREKMGRAPCCDKDGVRKGAWTPEEDEVLVQYIKKHGCGSWRTLPKHAGLLRCGKSCRLRWINYLRPDIKRGPFTAEEETTIIQLHGMLGNRWAAIASQLPGRTDNEIKNYWNTHLKKRLLRSGHSPMAQKPSFGPDETDIKSGSPAIRHMVQWEKARVEAESRLSMELESSLPNSCSSTNTHPDCFLQLWHSEVGQSFRTIMEKEAVSQSSASQASSAFADMAEEQASSSKPKLGDGNGFAGSESGFYEFIDSSDTALKLLLDMLDGNIGFPEELG	504

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa01g0646	504	PANTHER	MYB FAMILY TRANSCRIPTION FACTOR	232	441	-	-
	Bisa01g0646	504	ProSiteProfiles	Myb-type HTH DNA-binding domain profile.	240	292	IPR017930	-
	Bisa01g0646	504	MobiDBLite	consensus disorder prediction	445	465	-	-
	Bisa01g0646	504	ProSiteProfiles	Myb-like domain profile.	293	343	IPR001005	-
	Bisa01g0646	504	SMART	sant	297	345	IPR001005	-
	Bisa01g0646	504	SMART	sant	244	294	IPR001005	-
	Bisa01g0646	504	MobiDBLite	consensus disorder prediction	352	371	-	-
	Bisa01g0646	504	SUPERFAMILY	Homeodomain-like	243	339	IPR009057	-
	Bisa01g0646	504	ProSiteProfiles	Myb-type HTH DNA-binding domain profile.	293	347	IPR017930	-
	Bisa01g0646	504	CDD	SANT	247	292	IPR001005	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa01g0646	Bisa-ChrBisa01	9946646	9949585	Dispersed/Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa01g0646	232	502	MYB Transcription Factor Family	AT3G61250	54.804	1.56e-93	285

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	MYB	Bisa01g0646		Myb_DNA-binding	1.3e-15	CL0123

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