Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0646 ATGTGTTTCCATGGACTTTCTCTTCTTGTCCTTTCTGGCTTCTGCCAATCGGTCCAACTCAGAAGAGTCCAAAGACCAAAGGAAACTGATGCAAAAGGCTCAACCTTTGAGCCCTTGTGCGAAACACCCGGAAACCGTAACGTTAAATTTTTCAGAAATTTTCAAGGAAAATGTCAACTTGAAGTTCAAACTTCCACATCATCGACGTTTCTGAGACTCGCTCTCAATTTCTCTTCCATAACGGGATTTGTTTGTTTTAGTGGGTTTCAGAGAGTCTTTCTTCTGCCTGTTGAGTGTTCGACCGATTGCTTCAATGAAAGTTCTGTCGTTTTCTTTCTGGTCAAATCATATGAGGGTTGCTTGTTTTCTTTTTCATTTGTTTTGATATGTATGTATGACTATTTTCGTTTTGCTTTTTATGTTGCCATTAAGAACCCCGGTCATTGCCTTACAGGGCATGCACGTATTAAATGCAATTCTGGTCCTTTACGCCGCCCGATTGTACTATATATACGCATTTATAGCTCTGTTTCTTTCCATTATGACTCCATTGGGCTTTCCTTCTGCAACACTCTTCTTCCTTTCCCACTCTTTCTTCTTTCTTCTCTCTGTGTCTATGACCCTGTGACTGAGGTCATTGAAAAAGAAGAGCATACTGTAGTCCCAAATCAATCTGGTAATGAGAGGGAGAAGATGGGGAGGGCACCGTGTTGTGATAAAGATGGAGTGAGAAAAGGAGCTTGGACTCCTGAAGAAGACGAAGTGTTAGTTCAGTACATCAAGAAGCATGGCTGTGGTAGTTGGCGTACACTCCCCAAGCACGCAGGTCTCCTTCGATGTGGAAAAAGCTGCCGACTTCGTTGGATAAACTATCTTCGCCCTGACATAAAGCGTGGCCCTTTTACTGCTGAAGAAGAAACTACTATTATTCAACTTCATGGCATGCTCGGCAACAGGTGGGCTGCTATAGCATCTCAATTACCAGGAAGAACAGACAATGAAATTAAAAACTATTGGAACACCCATCTAAAGAAGCGCCTCCTTCGTTCAGGTCATTCCCCCATGGCACAAAAGCCCTCTTTTGGTCCTGATGAAACTGATATAAAATCTGGATCTCCTGCCATACGTCACATGGTACAGTGGGAAAAAGCTAGAGTTGAGGCAGAATCAAGGTTGTCAATGGAATTGGAGTCCTCATTGCCTAATTCTTGTTCATCAACTAACACACACCCTGATTGCTTTCTTCAACTTTGGCATTCCGAGGTGGGACAATCATTTCGCACGATCATGGAGAAGGAAGCAGTGAGTCAAAGCTCTGCATCCCAAGCAAGCAGTGCCTTTGCTGACATGGCTGAAGAACAAGCAAGCAGCTCTAAACCTAAGCTTGGAGATGGCAATGGCTTTGCTGGGTCAGAGTCAGGTTTTTATGAATTTATCGATAGTTCTGATACTGCATTAAAGCTTCTGCTAGATATGCTTGATGGCAATATAGGATTTCCAGAAGAATTGGGATAG 1515 0.4304 MCFHGLSLLVLSGFCQSVQLRRVQRPKETDAKGSTFEPLCETPGNRNVKFFRNFQGKCQLEVQTSTSSTFLRLALNFSSITGFVCFSGFQRVFLLPVECSTDCFNESSVVFFLVKSYEGCLFSFSFVLICMYDYFRFAFYVAIKNPGHCLTGHARIKCNSGPLRRPIVLYIRIYSSVSFHYDSIGLSFCNTLLPFPLFLLSSLCVYDPVTEVIEKEEHTVVPNQSGNEREKMGRAPCCDKDGVRKGAWTPEEDEVLVQYIKKHGCGSWRTLPKHAGLLRCGKSCRLRWINYLRPDIKRGPFTAEEETTIIQLHGMLGNRWAAIASQLPGRTDNEIKNYWNTHLKKRLLRSGHSPMAQKPSFGPDETDIKSGSPAIRHMVQWEKARVEAESRLSMELESSLPNSCSSTNTHPDCFLQLWHSEVGQSFRTIMEKEAVSQSSASQASSAFADMAEEQASSSKPKLGDGNGFAGSESGFYEFIDSSDTALKLLLDMLDGNIGFPEELG 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0646 504 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 232 441 - -
Bisa01g0646 504 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 240 292 IPR017930 -
Bisa01g0646 504 MobiDBLite consensus disorder prediction 445 465 - -
Bisa01g0646 504 ProSiteProfiles Myb-like domain profile. 293 343 IPR001005 -
Bisa01g0646 504 SMART sant 297 345 IPR001005 -
Bisa01g0646 504 SMART sant 244 294 IPR001005 -
Bisa01g0646 504 MobiDBLite consensus disorder prediction 352 371 - -
Bisa01g0646 504 SUPERFAMILY Homeodomain-like 243 339 IPR009057 -
Bisa01g0646 504 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 293 347 IPR017930 -
Bisa01g0646 504 CDD SANT 247 292 IPR001005 -
Bisa01g0646 504 FunFam Myb transcription factor 242 298 - -
Bisa01g0646 504 Pfam Myb-like DNA-binding domain 245 292 IPR001005 -
Bisa01g0646 504 Pfam Myb-like DNA-binding domain 298 343 IPR001005 -
Bisa01g0646 504 Gene3D - 245 297 - -
Bisa01g0646 504 FunFam MYB transcription factor 300 347 - -
Bisa01g0646 504 CDD SANT 300 343 IPR001005 -
Bisa01g0646 504 ProSiteProfiles Myb-like domain profile. 240 292 IPR001005 -
Bisa01g0646 504 Gene3D - 300 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0646 Bisa-ChrBisa01 9946646 9949585 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0646 232 502 MYB Transcription Factor Family AT3G61250 54.804 1.56e-93 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa01g0646 Myb_DNA-binding 1.3e-15 CL0123