Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0622 ATGGAGGAAAAAGAGAGTTTTGGTTCTGGGCTTGCGGCGAAGGTTAACGAAGCCCCGGGGAACTACCATGTAGCTTCCAGAAATGAAAACTCCGGTCAGTTCGCGAGCGGGCACGACACGGCGGCTCCGGCGCCAGTAAGTGTAGTGGCGACGGCGACTCCAGGTACAAAAGTTAAGAAGAAGAGAGGGAGGCCAAGGAAATATGGGCCGGACGGTAAAATGGCGTTGGCGTTGTCTCCGATGCCGATTTCATCGTCAATTCCATTGACCGGTGACTTCTCCGGCTGGAAACGAGGTAGAGGACGGTCTATTGAATCGATCAAGAAGTCTTATAAGTACGAAAACGAAACTCCAGGACCAGGTAATGGAATTGCATACTCTGTTGGTGCCAATTTCACACCCCATGTGCTCTCGGTTAATGCTGGCGAGGATGTTACTATGAAGGTTATGTCCTTCTCTCAACAAGGGTCCCGTGCTATTTGCATTCTTTCTGCAAATGGCATGATTTCAAATGTAACACTTCGTCAACCAACTTCTTCTGGGGGTACTTTAACATATGAGGGACGGTTTGAGATTCTTTCCTTGTCTGGCTCATATATGCCAACTGAGAATGGAGTAACAAAGAGCAGATCTGGTGGGATGAGTGTTTCTTTGGCAGGTCCAGATGGTCGAGTGGTCGGGGGTGGACTTGCTGGTCTGTTGGTTGCTGCAGGCCCTGTGCAGGTAGTCGTGGGCAGTTTCCTTCCAGGTCACCAGCAGGAGCACAAACCTAAGAAGCAGAAGATGGAGTATATATCAACCATCAACACTGCCCATTTTAGTCCTATGTCTGATCAAGAAATACAAGTCAGTTTTGGAGGAGTAAAGCCTATAATGACACCTGCTGCTCTTCAAGGAGACAACAATATTGCTTCTTTTAACAATTTCCAAGGCTCCAGGGATTCATCTACCGATGATAGATCACCTTTGCCTGAAAGAGATCCCAACCCTTGCCGTTCAAATGCTGAGGTTCCATGCTAA 1020 0.4814 MEEKESFGSGLAAKVNEAPGNYHVASRNENSGQFASGHDTAAPAPVSVVATATPGTKVKKKRGRPRKYGPDGKMALALSPMPISSSIPLTGDFSGWKRGRGRSIESIKKSYKYENETPGPGNGIAYSVGANFTPHVLSVNAGEDVTMKVMSFSQQGSRAICILSANGMISNVTLRQPTSSGGTLTYEGRFEILSLSGSYMPTENGVTKSRSGGMSVSLAGPDGRVVGGGLAGLLVAAGPVQVVVGSFLPGHQQEHKPKKQKMEYISTINTAHFSPMSDQEIQVSFGGVKPIMTPAALQGDNNIASFNNFQGSRDSSTDDRSPLPERDPNPCRSNAEVPC 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0622 339 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 35 307 IPR039605 GO:0003680
Bisa01g0622 339 MobiDBLite consensus disorder prediction 306 339 - -
Bisa01g0622 339 MobiDBLite consensus disorder prediction 20 74 - -
Bisa01g0622 339 Pfam Plants and Prokaryotes Conserved (PCC) domain 134 247 IPR005175 -
Bisa01g0622 339 Gene3D - 134 269 - -
Bisa01g0622 339 MobiDBLite consensus disorder prediction 23 37 - -
Bisa01g0622 339 SUPERFAMILY AF0104/ALDC/Ptd012-like 131 255 - -
Bisa01g0622 339 CDD DUF296 133 247 IPR005175 -
Bisa01g0622 339 FunFam AT-hook motif nuclear-localized protein 1-like 134 264 - -
Bisa01g0622 339 ProSiteProfiles PPC domain profile profile. 129 269 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0622 Bisa-ChrBisa01 9580040 9584069 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0622 38 264 AT-hook Motif Nuclear Localized (AHL) Family AT4G25320 61.017 3.15e-91 276