Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0614 ATGGGTTTTTCACCCCTTCTTCTTCTATCCTTGTCTCTCCTAGCTTTTTTCCTCTTGAACCCAAAATGGGTCTATGGGAACACAGAGCTAAGAGCCCTTATGGACATGAAGGCCTTTTTGGACCCAGAGAGCCGTTATCTGTCCTCATGGACTATCAATGGAAACCTATGTGATGGTTCATTCGAAGGAGTAGCTTGCAATGAGAAGGGTCAAGTGGCTAACATTTCGTTGCAGGGAAAGGGTCTCTCTGGAAGGCTCTCGCCTGCCATTGCAGGGCTCAAGCACCTCACAGGACTTTACTTGCACTATAACTCCTTGTCCGGAACTATACCCAGAGAAATCGCAAATTTGACCAGCTTGAGTGACTTGTATTTGAATGTGAATCAACTCTCTGGGGAAATCCCTTCTGAGATAGGCAAAATGGAGAACCTTCAAGTTTTGCAGCTCTGCTATAATCAGTTGACAGGCAGCATACCTACACAGTTTGGTGCATTGAAGAAGCTTGTTGTTCTTGCTCTGCAGTCAAATAATTTAACTGGGGCTATCCCTGCTAGTTTAGGTGATTCGGGAATGCTAATGAGGCTAGATTTGAGCTCTAATCGACTCTTTGGTTCCATTCCCACTAGATTAGCCGAATCTGCTTCACTGCAAGTTCTAGATGTTCGCAACAACACCCTCTCTGGAAATGTACCTCCTGCTCTGAAGAGATTAGATGATGGTTTTTTGTATGAGTACAATCTGGGATTATGTGGAGCTGGGTTTTCTTCCTTGAAAACTTGCAATGATTCGGACCATGTCAATCCGGTCAGACCCGACAAGCCATATGGAGCAGGTTTTGACGGTACATCAACGAGGGATATACCAGAAACTGCTAATGTGCAGTTGCCTTGCAATGGAACTCATTGCCAGAATTCATCAAAATCCAAACAATCTTTATCTATCATTGTTGGCATTGTTGTGTTTGCAATTGCAGTGCCAGCAATTGGTGTTCTAGCCCTCACACATTACCGTAGGCAAAAACAAAAGCTTGGAGGCTCCTTTGATGTCTCAAATAGTCATCTAAGTGCTGACCAAGCCAAGGGTATATACCAGAAAAATGGATCTCCTCTGGTCAGCCTTGAATACTCTAGTGGATGGGACCCTCTGGCTGATAGCCGGAATTTCAACGGGGACAGTCATGATATAATTCGTAGTTTCAGGTTCAACTTGGAAGAGGTAGAGACGGCTACTCAATATTTCTCGGAGATGAATTTGTTGGGCAAGAATAACTTCAGTGCTACATATAAAGGAATGTTAAGAGATGGATCTGCTGTTGCCGTTAAAAGCATTAGTAAAACAAGCTGCAAGTCTGATGAAGCTGAATTTCTCAAGGGACTGCACATTTTGACCTCATTGAGGAATGAGAATCTAGTGAGGTTGAGAGGGTTTTGTTGCTCGAGAGGACGTGGTGAGTGCTTTCTGATCTACGATTTCGTTCCTAATGGAAATCTTTCGTGCTACCTTGATGTGAAGGAAGGTGAAGGAGAAGTCCTTGAATGGTCAACTAGAGTTTCTATTGTGAAAGGAATTGCTAAAGGAATATCATATTTACATGCATACAGAGGGAACAAGCCTGCACTTGTTCACCAAAACATCTCAGCTGAGAAAGTGCTGGTTGATCAGCGATTCAACCCGATGCTCTCGGATTCTGGGCTTCACAAGCTTCTTACCAATGACATTGTGTTCTCAGCACTCAAGGCCAGCGCAGCAAAGGGTTACCTTGCTCCTGAATACACCACCACAGGCCGGTTCACAGAGAAAAGCGACGTGTATGCTTTCGGGGTGCTTCTCTTACAGATCCTCTCTGGGAAAAGAAAGATCACCTGCTCAATGCGCCTTGCTGCAGAAGCCTCAAGATTCCAAGAACTCATTGACCCTAATCTCCATGGCAAATTCTTCGAATACGAGGCAGCCAAGTTAGCCAAAATGGCCTTGCTTTGCACGCATGAGTCTCCTTTTGAGAGGCCATTGATGGAAGCTATTGTTCATGAATTGGGGAATTTCAGTAGCTGTCTCTGA 2058 0.4451 MGFSPLLLLSLSLLAFFLLNPKWVYGNTELRALMDMKAFLDPESRYLSSWTINGNLCDGSFEGVACNEKGQVANISLQGKGLSGRLSPAIAGLKHLTGLYLHYNSLSGTIPREIANLTSLSDLYLNVNQLSGEIPSEIGKMENLQVLQLCYNQLTGSIPTQFGALKKLVVLALQSNNLTGAIPASLGDSGMLMRLDLSSNRLFGSIPTRLAESASLQVLDVRNNTLSGNVPPALKRLDDGFLYEYNLGLCGAGFSSLKTCNDSDHVNPVRPDKPYGAGFDGTSTRDIPETANVQLPCNGTHCQNSSKSKQSLSIIVGIVVFAIAVPAIGVLALTHYRRQKQKLGGSFDVSNSHLSADQAKGIYQKNGSPLVSLEYSSGWDPLADSRNFNGDSHDIIRSFRFNLEEVETATQYFSEMNLLGKNNFSATYKGMLRDGSAVAVKSISKTSCKSDEAEFLKGLHILTSLRNENLVRLRGFCCSRGRGECFLIYDFVPNGNLSCYLDVKEGEGEVLEWSTRVSIVKGIAKGISYLHAYRGNKPALVHQNISAEKVLVDQRFNPMLSDSGLHKLLTNDIVFSALKASAAKGYLAPEYTTTGRFTEKSDVYAFGVLLLQILSGKRKITCSMRLAAEASRFQELIDPNLHGKFFEYEAAKLAKMALLCTHESPFERPLMEAIVHELGNFSSCL 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0614 685 CDD STKc_IRAK 419 678 - -
Bisa01g0614 685 Gene3D Ribonuclease Inhibitor 28 141 IPR032675 -
Bisa01g0614 685 SUPERFAMILY Protein kinase-like (PK-like) 389 678 IPR011009 -
Bisa01g0614 685 Gene3D Phosphorylase Kinase; domain 1 385 491 - -
Bisa01g0614 685 Pfam Protein tyrosine and serine/threonine kinase 417 678 IPR001245 GO:0004672|GO:0006468
Bisa01g0614 685 Gene3D Transferase(Phosphotransferase) domain 1 492 684 - -
Bisa01g0614 685 Pfam Leucine rich repeat N-terminal domain 27 67 IPR013210 -
Bisa01g0614 685 FunFam Protein NSP-INTERACTING KINASE 2 492 682 - -
Bisa01g0614 685 Pfam Leucine rich repeat 143 202 IPR001611 GO:0005515
Bisa01g0614 685 Gene3D Ribonuclease Inhibitor 143 252 IPR032675 -
Bisa01g0614 685 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 143 679 IPR046959 -
Bisa01g0614 685 ProSiteProfiles Protein kinase domain profile. 413 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g0614 685 SUPERFAMILY L domain-like 28 236 - -
Bisa01g0614 685 FunFam Protein NSP-INTERACTING KINASE 2 26 175 - -
Bisa01g0614 685 FunFam Protein NSP-INTERACTING KINASE 2 384 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0614 Bisa-ChrBisa01 9469140 9472424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0614 11 526 Miscellaneous Gene Families AT4G22730 55.344 0.0 566
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Bisa01g0614 PK_Tyr_Ser-Thr 4.5e-36 CL0016