Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0592 ATGGACGCTAGCAATTTTCATCGCGTTGATCATAAAAGGGGAGGCCCTTCTTCTTCTTCATCTTCTTCAGCCATTGATGATGAGGTTGGGGGAGAGAGAAAGATAGTAATAGTAAGATACAAGGAATGCCTCAAGAACCATGCAGCTTCAATAGGTGGAAATGCAACTGATGGGTGTGGAGAGTTCATGCCATGTCCACAAAAAGAAGGTACACCTCAGTCTTTCTTGTGCTCAGCCTGCAACTGCCACAGAAACTTCCACAGAAAAGAGATTCAACAATATTCTTCTAACCCTAATTCTTCTGAATCTGATCAATACCATCTCACTCCTCTGCTTCCAAACAATTCATTGTCATATCCCAACAAAAGGGGTTCAAATATATCTGATCAGTCTGATCATCACCATCACCACGAGGATAATATGAGAAACACTGTGGAAGGAGATCATGGGTTTGATTTGAAAGAAATGGGAAAGGCATGTGATGAGAAGGTGAGGATGAAGATGAAGAAGAGGTTTAGGACAAAGTTCAGTGTAGAACAGAAGGAGAAGATGGTAAGATTTGCAGAGAAGGCAGGGTGGAGGATGCACATGGTGGAGGAGTGTGTGGTGCAGCAGTTCTGCCAAGAGATAGGAATCAAGAGAAGAGTCCTCAAAGTGTGGATGCACAACAACAAGAACACTTATGCCAAAACAGACTTCTCCTCCTCCACTACCTAG 717 0.4324 MDASNFHRVDHKRGGPSSSSSSSAIDDEVGGERKIVIVRYKECLKNHAASIGGNATDGCGEFMPCPQKEGTPQSFLCSACNCHRNFHRKEIQQYSSNPNSSESDQYHLTPLLPNNSLSYPNKRGSNISDQSDHHHHHEDNMRNTVEGDHGFDLKEMGKACDEKVRMKMKKRFRTKFSVEQKEKMVRFAEKAGWRMHMVEECVVQQFCQEIGIKRRVLKVWMHNNKNTYAKTDFSSSTT 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0592 238 Pfam ZF-HD protein dimerisation region 38 91 IPR006456 -
Bisa01g0592 238 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 39 91 IPR006456 -
Bisa01g0592 238 FunFam Zinc-finger homeodomain protein 2 156 230 - -
Bisa01g0592 238 MobiDBLite consensus disorder prediction 94 148 - -
Bisa01g0592 238 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 40 90 IPR006456 -
Bisa01g0592 238 MobiDBLite consensus disorder prediction 94 126 - -
Bisa01g0592 238 Gene3D - 156 231 - -
Bisa01g0592 238 NCBIfam homeobox domain, ZF-HD class 169 226 IPR006455 -
Bisa01g0592 238 MobiDBLite consensus disorder prediction 1 28 - -
Bisa01g0592 238 SUPERFAMILY Homeodomain-like 165 230 IPR009057 -
Bisa01g0592 238 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 22 227 - -
Bisa01g0592 238 MobiDBLite consensus disorder prediction 127 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0592 Bisa-ChrBisa01 9215581 9216297 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0592 37 232 ZF-HD Transcription Factor Family AT1G14440 45.320 5.49e-53 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Bisa01g0592 ZF-HD_dimer 2.9e-27 No_clan