Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0587 ATGTCTGCCATGAAGAAGAAGCCTGAGCAGACTCGCATTGGGGTTGTATTCGATAAGTTGGTGAAGGAGCTTGGGGAATCCGTAGACTTTGAACTTCCAGATTGGTTTAATAAGTGGAAGCCAATGCCGTACAAATATATTAAACGCAATATATATCTCACGAAGAAGGTTAGGAAGCGGCATGATGATGATGGCATTTTCTGTTCTTGTACTCCTTCACCTGGATCTTCTAGTGTATGCGGTAAAGACTGCCACTGTGGGATGCTTCTGTCTAGTTGTTCATCGGGCTGTAAATGTGGGAGTTCCTGTCTGAACAAACCATTCCAGAATCGACCTGTGAAAAAGATGAAATTGGTTAAGACTGAGAAATGTGGTTCTGGAATTGTGGCGGAGGAAGATATTGAGCAAGGGGAGTTTGTCATAGAATATGTAGGAGAAGCAGTCATTGATGACAAAACATGTGAAGAAAGGCTTTGGAATATGAAACATCGGGGCGAGACAAATTTCTACTTATGTGAAATCAATCGAGATATGGTGATTGATGCAACATACAAGGGAAACAAATCAAGATATATGAACCATAGTTGCTGCCCCAATACTGAGATGCAAAAGTGGTTGACTCCTAATTCTTTTCCTCATATGGTCAAGCAGATAATTGATGGTGAAACAAGAATTGGTATATTTGCAACTCGTGACATTAGGAAGGGCGAGCATCTGACATATGATTACCAGTTTGTTCAGTTTGGTGCAGATCAGGATTGTCATTGTGGTGCTGTTAGGTGCAGGCGTAAGCTGGGGGTTCGACCAACAAAGCCTAAAATGTCATCTGATGCTGCATTAAAATTAGTTGCTTATCAGGTATATCAGAATGGAGGTTTGCATATGGGAAGTTCTTGCCTTATTGACAAACCAAAGTACTCCCGCAATTGCATTGGTGAAGTCATTAGGATAAAATACCCAATGAATGAGAGGTTTGGGATTATAAGACGGTTTGATAAATATTCCAAAAAGCACTCTATCATGTTTGAGAATGGTGGTGTTCATTTTATTGACATGTCAAAGGAAGACTGGGAACTTGTGACAATGTGA 1089 0.4059 MSAMKKKPEQTRIGVVFDKLVKELGESVDFELPDWFNKWKPMPYKYIKRNIYLTKKVRKRHDDDGIFCSCTPSPGSSSVCGKDCHCGMLLSSCSSGCKCGSSCLNKPFQNRPVKKMKLVKTEKCGSGIVAEEDIEQGEFVIEYVGEAVIDDKTCEERLWNMKHRGETNFYLCEINRDMVIDATYKGNKSRYMNHSCCPNTEMQKWLTPNSFPHMVKQIIDGETRIGIFATRDIRKGEHLTYDYQFVQFGADQDCHCGAVRCRRKLGVRPTKPKMSSDAALKLVAYQVYQNGGLHMGSSCLIDKPKYSRNCIGEVIRIKYPMNERFGIIRRFDKYSKKHSIMFENGGVHFIDMSKEDWELVTM 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0587 362 Gene3D SET domain 33 282 IPR046341 -
Bisa01g0587 362 CDD SET_ASHR3-like 115 266 - -
Bisa01g0587 362 SMART PostSET_3 250 266 IPR003616 -
Bisa01g0587 362 PANTHER SET DOMAIN PROTEINS 28 281 - -
Bisa01g0587 362 SMART shorttest3 63 113 IPR006560 GO:0005634|GO:0042054
Bisa01g0587 362 ProSiteProfiles SET domain profile. 114 244 IPR001214 GO:0005515
Bisa01g0587 362 ProSiteProfiles AWS domain profile. 63 112 IPR006560 GO:0005634|GO:0042054
Bisa01g0587 362 SUPERFAMILY SET domain 37 262 IPR046341 -
Bisa01g0587 362 SMART set_7 114 250 IPR001214 GO:0005515
Bisa01g0587 362 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 37 307 IPR025787 -
Bisa01g0587 362 FunFam Histone-lysine N-methyltransferase 30 282 - -
Bisa01g0587 362 Pfam SET domain 125 243 IPR001214 GO:0005515
Bisa01g0587 362 ProSiteProfiles Post-SET domain profile. 250 266 IPR003616 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0587 Bisa-ChrBisa01 9148389 9160181 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0587 87 265 C2H2 Transcription Factor Family AT2G23740 32.821 2.47e-20 90.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Bisa01g0587 SET 2.4e-20 No_clan