Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0494 ATGAAAGCGCCAAGCCTCCGTCTGTCGTCCTACTGCCCACCGCCATACCCTCGTACAAATATTGTGCAACTGGCAGCCACAGGATTGAAAGACACTGGAGAGGCGAATTTCGAGCTAGGGCACAGAAGAACCCTTCATCTGTCTCTCGCTGCTTCGTCTCTCGCTTTCTGCGCCAAACGGTTATTGGATTCTGATTGTTCTGAAATGGCTGATACTGATAAGAACATTGAGGTATGGAAGATCAAGAAATTGATCAAAGCTCTTGAGGCTGCTCGAGGAAATGGGACAAGTATGATTTCCCTTATCATGCCCCCCCGTGATCAAATATCTCGTGTTACCAAGATGCTTGGTGATGAATTTGGAACTGCTTCAAACATAAAAAGCAGGGTGAATCGGCAGTCTGTGCTTGGTGCAATCACTTCTGCTCAGCAGAGGCTCAAGCTTTATAACAAGGTTCCTCCAAATGGGCTTGTTCTTTATACTGGGACAATTGTAACAGAAGATGGGAAGGAAAAGAAGGTGACTATTGATTTTGAGCCTTTCAGGCCTATCAATGCATCTCTTTACCTTTGTGACAACAAGTTTCATACTGAAGCTCTAAATGAGCTGCTTGAGTCTGATGACAAGTTTGGGTTTATAGTCATGGATGGCAATGGTACTCTTTTCGGGACCTTGAGCGGTAATACGAGAGAGGTGCTTCATAAATTTAGTGTGGATCTCCCAAAGAAACATGGAAGAGGAGGTCAGTCAGCCCTACGATTTGCTCGTCTTAGAATGGAGAAGCGTCATAACTATGTGAGGAAGACTGCAGAGCTTGCAACACAGTTTTATATCAATCCTTCTACCAGTCAGCCCAATGTTTCAGGATTAATCCTGGCTGGTTCAGCTGATTTCAAAACTGAACTTAGTCAGTCTGATATGTTTGATCCTCGACTTCAGGCAAAAATACTCAATGTTGTTGATGTATCTTATGGAGGGGAGAATGGATTCAATCAGGCTATTGAGCTATCAGCGGAGATTCTGGCTAATGTGAAGTTCATCCAGGAGAAACGCCTGATTGGAAAATACTTTGAGGAGATTAGTCAAGATACTGGGAAGTATGTTTTTGGGGTTGATGATACTCTCAAAGCTCTGGAGATGGGTGCCGTTGAGACACTTATTGTCTGGGAAAATCTGGATATGAATAGGTATGTCTTGAAACATAGCACTACTGGCGAGACTATTATAAAACACTTCAACAAGGAACAGGAGGTAGTCCAGGGCAATTTCCGGGATCCTGCTACTAATGCTGAATATGAGGTTCAGGAAAAGTTGTCTCTCTTGGAGTGGTTTGCAAATGAGTACAGACGATTTGGTTGCACTCTCGAGTTTGTCACAAATAAATCACAAGAAGGTTCACAGTTTTGCAGGGGTTTTGGTGGTGTGGGGGGGATCCTGCGTTACCAGCTTGATATGAGATCATTTGATGATTTCTCTGATGACGGAGAGTTGTATGATGATTCTGAATAG 1509 0.4361 MKAPSLRLSSYCPPPYPRTNIVQLAATGLKDTGEANFELGHRRTLHLSLAASSLAFCAKRLLDSDCSEMADTDKNIEVWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFYINPSTSQPNVSGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILANVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALEMGAVETLIVWENLDMNRYVLKHSTTGETIIKHFNKEQEVVQGNFRDPATNAEYEVQEKLSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGVGGILRYQLDMRSFDDFSDDGELYDDSE 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0494 502 FunFam Peptide chain release factor subunit 1 344 502 - -
Bisa01g0494 502 Gene3D eRF1 domain 2 201 342 IPR042226 -
Bisa01g0494 502 Pfam eRF1 domain 1 83 203 IPR005140 -
Bisa01g0494 502 Pfam eRF1 domain 2 209 342 IPR005141 -
Bisa01g0494 502 Pfam eRF1 domain 3 346 483 IPR005142 -
Bisa01g0494 502 SMART eRF1_1_2 69 205 IPR005140 -
Bisa01g0494 502 FunFam Eukaryotic peptide chain release factor subunit 1 67 200 - -
Bisa01g0494 502 FunFam Eukaryotic peptide chain release factor subunit 1 201 342 - -
Bisa01g0494 502 SUPERFAMILY N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 71 205 IPR024049 -
Bisa01g0494 502 PANTHER PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 68 494 IPR004403 GO:0003747|GO:0006415
Bisa01g0494 502 NCBIfam peptide chain release factor aRF-1 78 482 IPR004403 GO:0003747|GO:0006415
Bisa01g0494 502 SUPERFAMILY Translational machinery components 207 341 - -
Bisa01g0494 502 SUPERFAMILY L30e-like 343 485 IPR029064 -
Bisa01g0494 502 Gene3D - 344 502 IPR029064 -
Bisa01g0494 502 Gene3D eRF1 domain 1 64 200 IPR024049 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0494 Bisa-ChrBisa01 7146391 7148966 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0494 69 502 Eukaryotic Initiation Factors Gene Family AT3G26618 88.761 0.0 808