Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0482 ATGTTCCAGAATCTCTACCGCCGTGGACCCCACACACAATCCGGAAAGAACTTTCACGGGGTTTTCCGTTTCCTGTCCTATAGTCGCAAGTCTGTTGGATTTATTTTTAGTACTTTTGGCTTCATGTTCATCATGGTGAGGAAAAAGAGAACTGAAGCGCCCGGTGGAGGTGAAAGCTCTGAGGCTCAGGGGAGTGGGGGCAGTGGTCGAGGTGCTCAACGCCCTGCTGAAAGGAGTGCTCCACCCCCTCAACAGCCGGTAGGAGGGGGAGGATTCCAAGGAGGTAGAAGTTGGGGTCCCCAAGGAGGACGGGGGGGTTATGGTGGGGGGCTTGGTCGTGGAGTACCCCAACAGCAGTATGGAGGCCCCCCTGACTATCAAGGTAGGGGAAGGGGAGGGCCCTCTCAGCAAGGAGGTCGTGGACGTGGTGGTGGTGGCATGGGCAGTGGCCGTGGTAGTGGACCTTCTTATGGTGGCCCATCCCGACCTCAAGCTCCCGAGCTGCACCAAGCTACCCCAGTTCCTTATCAAGCTGGGGTGATGACTCAGTCTGCACCATCTGAGGCCAGTTCTTATTCCCAGCAGCCTGAGGTCTCAGAAGCTGAACAGCAAATTGGGCAGATGGTAATTCATTCAGAAGCTGTGTCTCCTGTTCCACCCTCAAGTAAATCAGTGAGGTTTCCGCCTAGGCCTGGAAAGGGTAGCTATGGCGCCAAATGTATAGTTAAGGCGAACCACTTTGTTGCTGAGTTACCTAATAAAGATCTGCACCAGTATGATGTCACTATAACACCTGAAGTGACTTCAAGAGGTGTCAACCGTGCTGTTATGGAGCAGTTGGTGAGGCTGTACCGGGAGTCTCATTTGGGAAAGAGACTTCCTGCATATGATGGGCGCAAGAGCCTTTATACTGCCGGTCCACTTCCTTTTCATTCAAAGGAGTTCAGAATCACCCTCCTTGATGAAGATGATGGAACAGGGGGGCCAAGGAGAGAAAGGGAGTTCAGAGTTGTGATAAAATTTGCTGCCCAGGCAGACCTTCATCATCTAGGACTATTTCTGCAGGGGAGGCAAGCTGACGCACCTCAGGAAGCTCTTCAGGTTCTAGACATTGTTCTGCGTGAACTACCTACTACTAGGTATTGTCCTGTAGGAAGATCATTTTATTCACCAAATCTAGGTAGGAGGCAACCTTTAGGTGAAGGACTGGAAAGTTGGCGTGGTTTCTATCAAAGTATTCGCCCCACTCAGATGGGATTATCTCTCAACATTGATATGTCCTCCACTGCATTTATTGAACCATTGCCAGTTATTGACTTTGTGACTCAGTTGCTCAATAGGGATGTATCCACACGTCCATTGTCTGATGCTGATCGTGTAAAGATCAAGAAAGCACTCCGGGGTGTCAGAGTTGAAGTGACACACCGTGGAAATATGAGAAGAAAATATCGCATCTCTGCTTTGACTTCACAGGCTACCAGAGAGCTGACATTCCCCGTTGGTGAAAGAGGAACAACAAAATCTGTTGTGGAGTATTTCTCTGAGACATATGGATTTGCTATTCAACATACTCAGTTGCCTTGTTTGCAAGTGGGCAATACACCGAGACCTAACTATTTACCCATGGAGGTTTGTAAGATAGTAGAAGGTCAAAGGTACTCAAAGAGGTTGAATGAACGGCAGATTACTGCATTGCTCAAAGTCACATGCCAGCGTCCTGTTGAAAGGGAGCGGGATATTATGCAGACGGTGCATCATAATGCTTACCATGAAGATCCTTATGCTAAGGAGTTTGGAATTAAAATCAGCGAGAAGCTAGCCCAAGTTGAAGCTCGCATCCTTCCTCCACCCTGGCTTAAATATCATGATACAGGTAGAGAGAAGGATTGCCTACCTCAAGTTGGCCAGTGGAATATGATGAATAAGAAAATGGTTAATGGCGGAACGGTCAACCACTGGATCTGCATAAATTTTTCCAGGAATGTTCAAGATAGTATGGCACGTGGGTTTTGTCATGAACTTGCTCAAATGTGTTATATATCTGGCATGGCTTTCAATCCAGAACCAGTACTTCCCGCACTCAGTGCCCGCCCGGATCTGGTGGATAAGGTTCTTAAAACACGCTATCATGATGCAAAAAACAGACTGCAGGGAAAGGAGCTTGATCTGCTAATTGTTATTTTGCCTGATAATAATGGCTCTCTCTATGGTGATCTGAAACGTATATGTGAGACAGATCTTGGGGTTGTCTCTCAGTGCTGTTTGACCAAACACGTCTTTAAAATGAGCAAGCAGTATCTAGCCAATGTTGCTTTGAAAATTAATGTTAAGGTTGGTGGACGGAACACAGTCCTTGTTGATGCACTTTCACGGCGCATACCTTTGGTCAGTGACAGGCCTACTATTATATTTGGAGCTGACGTAACTCATCCGCATCCTGGAGAGGACTCAAGTCCATCAATAGCGGCTGTTGTGGCATCCCAAGACTGGCCAGAAATTACCAAGTATGCGGGCTTGGTGTGTGCTCAAGCACATCGACAGGAGCTCATTCAAGACCTTTTCAAACAATGGCAAGATCCAGTGAGGGGAACAGTAACTGGTGGAATGATAAAGGAACTCCTTATATCTTTCCGGAGGGCCACAGGTCAGAAGCCACAGCGCATTATATTTTACAGGGATGGCGTGAGTGAAGGGCAGTTCTATCAAGTTTTACTGTTTGAGCTTGATGCTATTCGCAAGGCATGTGCATCCCTGGAGCCTAATTATCAGCCTCCTGTCACTTTTGTGGTTGTTCAAAAGCGCCATCACACTAGGCTTTTTGCCAGCAACCATCATGACAGGAGTTCTGTTGACAGGAGTGGGAATATCCTTCCTGGCACAGTTGTGGATTCCAAAATATGCCATCCAACTGAGTTTGACTTTTACCTTTGTAGTCATGCTGGGATACAGGGCACAAGCCGTCCAGCTCATTACCATGTATTGTGGGATGAAAACAATTTTACAGCTGATGCACTGCAAACATTGACGAACAACCTTTGTTATACCTATGCAAGATGCACACGTTCTGTTTCAATCGTGCCCCCTGCATATTATGCTCACTTGGCTGCTTTCCGAGCTCGATTTTATATGGAGCCTGAGACATCAGAGAGTGGGTCCATGACAAGTGGTGCTGCTTCTGCACGCGGAGTTGGCGGTGTACGTAGCACTAGGGCACCCGGTGCTAATGCTGCTGTTAGACCCCTTCCAGCTCTTAAGGAGAATGTAAAGAGGGTTATGTTCTATTGTTAA 3288 0.4751 MFQNLYRRGPHTQSGKNFHGVFRFLSYSRKSVGFIFSTFGFMFIMVRKKRTEAPGGGESSEAQGSGGSGRGAQRPAERSAPPPQQPVGGGGFQGGRSWGPQGGRGGYGGGLGRGVPQQQYGGPPDYQGRGRGGPSQQGGRGRGGGGMGSGRGSGPSYGGPSRPQAPELHQATPVPYQAGVMTQSAPSEASSYSQQPEVSEAEQQIGQMVIHSEAVSPVPPSSKSVRFPPRPGKGSYGAKCIVKANHFVAELPNKDLHQYDVTITPEVTSRGVNRAVMEQLVRLYRESHLGKRLPAYDGRKSLYTAGPLPFHSKEFRITLLDEDDGTGGPRREREFRVVIKFAAQADLHHLGLFLQGRQADAPQEALQVLDIVLRELPTTRYCPVGRSFYSPNLGRRQPLGEGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIDFVTQLLNRDVSTRPLSDADRVKIKKALRGVRVEVTHRGNMRRKYRISALTSQATRELTFPVGERGTTKSVVEYFSETYGFAIQHTQLPCLQVGNTPRPNYLPMEVCKIVEGQRYSKRLNERQITALLKVTCQRPVERERDIMQTVHHNAYHEDPYAKEFGIKISEKLAQVEARILPPPWLKYHDTGREKDCLPQVGQWNMMNKKMVNGGTVNHWICINFSRNVQDSMARGFCHELAQMCYISGMAFNPEPVLPALSARPDLVDKVLKTRYHDAKNRLQGKELDLLIVILPDNNGSLYGDLKRICETDLGVVSQCCLTKHVFKMSKQYLANVALKINVKVGGRNTVLVDALSRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEITKYAGLVCAQAHRQELIQDLFKQWQDPVRGTVTGGMIKELLISFRRATGQKPQRIIFYRDGVSEGQFYQVLLFELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFASNHHDRSSVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADALQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSESGSMTSGAASARGVGGVRSTRAPGANAAVRPLPALKENVKRVMFYC 1095
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0482 1095 ProSiteProfiles Piwi domain profile. 723 1044 IPR003165 GO:0003676
Bisa01g0482 1095 SMART PAZ_2_a_3 439 571 IPR003100 GO:0005515
Bisa01g0482 1095 SUPERFAMILY PAZ domain 241 586 IPR036085 GO:0005515
Bisa01g0482 1095 Pfam N-terminal domain of argonaute 239 373 IPR032474 -
Bisa01g0482 1095 Pfam PAZ domain 439 564 IPR003100 GO:0005515
Bisa01g0482 1095 SMART DUF1785_2 382 434 IPR014811 -
Bisa01g0482 1095 MobiDBLite consensus disorder prediction 52 168 - -
Bisa01g0482 1095 Pfam Mid domain of argonaute 632 706 IPR032473 -
Bisa01g0482 1095 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 218 1045 - -
Bisa01g0482 1095 CDD Piwi_ago-like 593 1043 IPR045246 -
Bisa01g0482 1095 SMART Piwi_a_2 723 1044 IPR003165 GO:0003676
Bisa01g0482 1095 FunFam Protein argonaute-2 428 554 - -
Bisa01g0482 1095 Pfam Argonaute linker 2 domain 575 621 IPR032472 -
Bisa01g0482 1095 Pfam Piwi domain 724 1043 IPR003165 GO:0003676
Bisa01g0482 1095 Gene3D paz domain 428 553 - -
Bisa01g0482 1095 CDD PAZ_argonaute_like 434 548 - -
Bisa01g0482 1095 Gene3D - 613 786 - -
Bisa01g0482 1095 FunFam Argonaute 10 613 786 - -
Bisa01g0482 1095 ProSiteProfiles PAZ domain profile. 435 549 IPR003100 GO:0005515
Bisa01g0482 1095 Pfam Glycine-rich region of argonaut 121 215 IPR024357 -
Bisa01g0482 1095 MobiDBLite consensus disorder prediction 181 203 - -
Bisa01g0482 1095 FunFam protein argonaute 10-like 792 1095 - -
Bisa01g0482 1095 Gene3D - 792 1095 IPR036397 GO:0003676
Bisa01g0482 1095 SUPERFAMILY Ribonuclease H-like 709 1044 IPR012337 -
Bisa01g0482 1095 Pfam Argonaute linker 1 domain 383 433 IPR014811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0482 Bisa-ChrBisa01 6993500 7001086 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0482 125 1095 Eukaryotic Initiation Factors Gene Family AT1G48410 81.595 0.0 1618