Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0479 ATGGGAATGCAGGACCAAATAGAAGGAACAAAGTTAAATAACTCTGGCAGTGCTATTAACAACCATTCCAATGATGGCACAAAATCTGAAAATGTTGCCCTATTGAAGGATAAAACTCCTGATGGAAACAACCACACTCCTAAGGTGAGGAAACCATATACCATTTCTAAGCAAAGGGAAAAGTGGACAGAAGAAGAGCATCAGAAGTTCCTTGAAGCTTTGAAATTGTATGGTCGTGGTTGGCGTCAAATTGAAGGTACTAAAACTGCTGTTCAGATACGAAGCCATGCTCAGAAGTTCTTCTCTAAGGTCGTACGGGAAACTGATAGCAGTGCTGATAGTTCTATAAAACTTAGTGATATTCCTCCTCCTCGACCAAAGAGGAAACCCCTGCATCCATATCCCCGTAAATCAGTTGATTCTTTCAAAGGACACTCCATAACAAATGAACAAGAGCGATCTCCATCCCCTAACCTGTCAGTTGCAGAGAAAGACACCCAATCTCCGACCTCTGTGCTATCTGCTGTTAATTCAGAAGCATTTGGGTCAGCATTTTCAGAGCAGACTAACAGATGTTGTTCACCAAATTCTTGCACCACTGACATTTACTCGGCCAGCTTATCACCTGTTGAAAAGGAAAATGATTGCATGACATCTAACTTCTCTGAGGAGGAAGAGAAAGGATCTCTAGCTTCAGTTTCTTTATCTACTGGTCTGAGCCTACACTTGTTGTCTACGAAGTCCGAGTTAAGCTCTAAGGAAACTGAATTCTTTAAGGAAGATGCTACCAATATGCTGCACGTTGCAAGTATTAAACTATTTGGAAGAACTGTCTCCATGGTAGATAATCAGAAGTCACAGGATTTAGATGGAGAGAATAGTAAGTCAACTTCATGCAAGTCTGATCAAGGGGATGTCGTAGACATGCAATTATCACTGGGCATATGTAATAATTCTAACTTGAACGCAACCCCTGAAGAAGCTCAAGTGAAATGCTTGAAATACCCGAAAGAGAACCTGTGCCTCGTTAAACCTGCACCTGATGAAACTGTGTCATGGTGGAATATGTATCATAGCCGTTCAGTTTTTCACCTTAACCCATGTAACCAAATCCTCTATCCTACACCAATTCGTCCATCTTTGAAAGACAGAATGACAGAAAAGGAAAGTTCCTGCACTGGTTCGAATGCTGAACCAGTTTGTGAAATGGTAAATGGAGACAGGAACTCAGAAGCTGATGATTCTCAAAGCCAATCGTCTCATCAGGAGGCGGGTATTGTACCCCACAAGAACTCTCCAAGAGGATTTGTACCATACAAAAGATGCTTGGCTGAGAGAGATGCAAATTCAGCAATTGTTTCACTGGAAGAGAGGGAGGGGCGACGAGCTCGGGTATGCTCATAG 1404 0.4224 MGMQDQIEGTKLNNSGSAINNHSNDGTKSENVALLKDKTPDGNNHTPKVRKPYTISKQREKWTEEEHQKFLEALKLYGRGWRQIEGTKTAVQIRSHAQKFFSKVVRETDSSADSSIKLSDIPPPRPKRKPLHPYPRKSVDSFKGHSITNEQERSPSPNLSVAEKDTQSPTSVLSAVNSEAFGSAFSEQTNRCCSPNSCTTDIYSASLSPVEKENDCMTSNFSEEEEKGSLASVSLSTGLSLHLLSTKSELSSKETEFFKEDATNMLHVASIKLFGRTVSMVDNQKSQDLDGENSKSTSCKSDQGDVVDMQLSLGICNNSNLNATPEEAQVKCLKYPKENLCLVKPAPDETVSWWNMYHSRSVFHLNPCNQILYPTPIRPSLKDRMTEKESSCTGSNAEPVCEMVNGDRNSEADDSQSQSSHQEAGIVPHKNSPRGFVPYKRCLAERDANSAIVSLEEREGRRARVCS 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0479 467 SUPERFAMILY Homeodomain-like 53 104 IPR009057 -
Bisa01g0479 467 Pfam Myb-like DNA-binding domain 59 99 IPR001005 -
Bisa01g0479 467 MobiDBLite consensus disorder prediction 1 61 - -
Bisa01g0479 467 MobiDBLite consensus disorder prediction 111 172 - -
Bisa01g0479 467 MobiDBLite consensus disorder prediction 122 139 - -
Bisa01g0479 467 ProSiteProfiles Myb-like domain profile. 54 101 IPR001005 -
Bisa01g0479 467 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 54 105 IPR017930 -
Bisa01g0479 467 MobiDBLite consensus disorder prediction 142 172 - -
Bisa01g0479 467 MobiDBLite consensus disorder prediction 31 45 - -
Bisa01g0479 467 PANTHER SWI/SNF COMPLEX-RELATED 25 296 - -
Bisa01g0479 467 SMART sant 58 103 IPR001005 -
Bisa01g0479 467 MobiDBLite consensus disorder prediction 389 434 - -
Bisa01g0479 467 CDD SANT 61 101 IPR001005 -
Bisa01g0479 467 MobiDBLite consensus disorder prediction 410 426 - -
Bisa01g0479 467 Gene3D - 61 105 - -
Bisa01g0479 467 MobiDBLite consensus disorder prediction 7 30 - -
Bisa01g0479 467 NCBIfam myb-like DNA-binding domain, SHAQKYF class 57 103 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0479 Bisa-ChrBisa01 6965307 6967830 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bisa01g0479 Myb_DNA-binding 8.9e-10 CL0123