Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0467 ATGGAAAAGAGGACGGTCTGTGGCGGAGACGATGGAGGTCGGAGGACAAGAGAAGACGATGACGATTGGGAGGAAGAGGAGGACGAAGAAGAGTACAGCTCCGGGAAGAAGACGTGGTTGAGGCCTCGTTTTGATTTATGTTTCAGCGATCCCGACTCTAGTTGGAGACTCGGAGCCACCGCACACGGAGGAACCGCCTCTGATCTCCGGCGCCGATTCCTCATTCATCCTGATAACTGTGTCCACCATTCCTGGGTCGAGCAAATTCCGTTTTCTCAGAGATGGCTACAATATTGTTGGCAAATCTGCAGGTGGTATGCCGTGTGGAAGCATTTCATTTTGATATGGGCAGTGTACTCGTCCTTTTTCACTCCCATGGAGTTTGGATTCTTCAGAGGGTTGCCGGAGAAAATCTTCTTACTTGACATCGCCGGACAATTCGCTTTCCTCATCGACATCGTTGTCCGGTTCTTCGTCGCCGATCGTGATACCCACTCCTATTGCATGGTCTACAATCGCAATCAAATTGCCATGAGGTATTTGAAGTCTCGGTTCTTAGTTGATTTTCTGAGTTGTCTGCCGTGGGATTATATTTACAAGGCTACTGGCAGGAAAGAGCCAGTCAGGTATCTTTTATGGATTAGGCTAAGTCGAGCATGTAGAGTGGACGAGTATTTTGAGAAGCTGGAGAAGGATATTAGGATCAATTACCTCTTTACAAGAATTGTGAAACTTCTTGTTGTTGAACTTTATTGCACACACACAGCTGCCTGCATCTTCTACTATCTTGCTACCACTATGCCCCCAACCAAGGAAGGTTATACATGGATAGGCAGCTTAAAGATGGGTGACTATAGCTATTCAGACTTTAGACATATTAACCTGTGGAAGCGTTATGTGACATCACTCTACTTTGCAATTGTTACCATGGCAACTGTTGGCTACGGAGAGATTCATGCAGTCAATGTCAGGGAAATGATATTTGTCATGATTTATGTCTCCTTTGATATGATTCTTGGTGCTTACCTTCTTGGTAATATGACAGCATTAATTGTCAAGGGATCAAAAACAGAGAAGTTTAGGGATAAGATGGCTGATATTATTAAATACATGAACAAAAACAATTTGGACAAGCAGATAAGTAAAGCAATAAAAGGCCATATGCACTTACAGTATGATCGCAGTTACACTGAGGCTGCTGTTCTTCAGGATATTCCAGCCTCTATTCGCACAAAGATTTCAGTAAATTTGTATGAGCAGTTTATACAAAAAGTTCCTCTTTTCAAGGGATGCTCCTTGGGGTTCATTAAGCAGATTGCAATCAGAGTCCATGAAGAATTTTTTCTCCCCGGAGAAGTGATTATGGAGCAAGGAAAAGTAGCAGATCAACTTTACCTTGTATGTCATGGTGAGCTGGATGAGATGAGGACAGAAGATGGTGATAAAGAAGAGTTAATTAGGCATTTGCAAAATTACTGCTCCTTTGGCGAGGTTTCTTTTCTGTGCAATATACCTCAACCTTCCATGATACGAGCTCTTGAATTTTGCAAGGTTTTGAGACTAGATAAGCATTCCTTTACAGAAATACTGAAGATATATTTTGTAGATGGTCGAGTTATCTTGAACAATCTTCTTGAGGGAAAAGACTCCAGTCTTCAGCATAAGCTCTTGGAATCAGACTTCTCCTTGACTATTGAAAACCACGAAACAGAGGTGGCCATGAGAATGAATTGTGCTGTCTATGAGGGGGACCTTCACCTGTTAAAACGGTTGATTGGATCAGGAGCAGATCCCAATAAGATTGATTACGATGGCAGATCACCCTTGCATATTGCTGCATCTAAAGGATATGTAGATATTGCTTGCTTTCTTATTGAACAAGGAGTAGTCATCAACGTCTCAGATAAATTTGGGAATACTCCCTTGCTTGAAGCCATCAAGAATGGAAATGACGAAGTAGCTTCTTTACTTGCTGATGTGGGGGCCACTCTTACTATAGATAATGCTGGAAATTTTCTCTGCATGACTGTTGCAAAAAAGGAGTTGGACCTTTTAAAAAAGGTTTTAGCTTATGGTATTAATCCAAATTCCAGAAATTATGATCAGCGAACACCTCTTCACATAGCTGCTTCTGAGGGATTGTGTACAATGGCTGAGTCGCTTCTAGAAGCAGGAGCAAGTGTTTTATCAAAGGACAGATGGGGAAATACACCGCTTGATGAAGCTCGTACTGGTGGCAATAGGATTCTGATCAAAATGCTTGAAGTTGCAAAAATTTCTCAGTTGGCTGAGTTATCCAATAATGTACAGGAAACTTGTGATGAAACTCCGAGAAAGAGATGCACAGTATTTCCTAACCATCCATGGGATCAGAAAGCGGATAGAAGAGAGGGGCTAGTCCTATGGGTTCCACAAAGCATTGAAGAACTTGTAAAGGTGGCAATGAAACATCTGAAATCTCCAAGCGGTTCCTTTATATTATCAGAGCATGGGGGTAAAATTCTTGATGTAGGCCTGATTAGCAATGATGAGAAGCTATTTCTGGAACTTGGCTTGAAGGATGAAACTCTAACAGCATTAGTCCCTTCCTACTCCATATTCTTGTGAATTGAAGTATTTGCAGAAGAATTAAGGAAGGAAGGAAGGCAGGAAGTGGGAAGTGATAGCAGCATGGCGCTTCAGTGGATGATTCTGACGTACGTGGTGGCAGCTGAGGCGGCCGTCGCTGTTCTTCTTACGCTTCCCGCACCTAAGCTCCTCAAGAACCGTTTGGTCTCTCTTGTATCCCTCATTCTTCAACCCGCCTTCTCCGTCGTCCCTTTTGCTGGCTTTCAGCTTCTCGATATATACTGGAAGAATGAACATCGGTTGACGTGCACTTCGGAGGTCTGTTCTGCTGCAGAGAGAGATCGATATGAAAAATCTATCTACAAAGCTCAGAGAAATGTCGTACTGTGTGCTGCAGCATGTCTTCTCTACTGGTGTATATACCGTATTTGTAAGTATCAGAAGGAGATTCAAAGTCTGGAGGAAGTGGAGAAAAGATACAAGGCTCAGTAG 3060 0.4278 MEKRTVCGGDDGGRRTREDDDDWEEEEDEEEYSSGKKTWLRPRFDLCFSDPDSSWRLGATAHGGTASDLRRRFLIHPDNCVHHSWVEQIPFSQRWLQYCWQICRWYAVWKHFILIWAVYSSFFTPMEFGFFRGLPEKIFLLDIAGQFAFLIDIVVRFFVADRDTHSYCMVYNRNQIAMRYLKSRFLVDFLSCLPWDYIYKATGRKEPVRYLLWIRLSRACRVDEYFEKLEKDIRINYLFTRIVKLLVVELYCTHTAACIFYYLATTMPPTKEGYTWIGSLKMGDYSYSDFRHINLWKRYVTSLYFAIVTMATVGYGEIHAVNVREMIFVMIYVSFDMILGAYLLGNMTALIVKGSKTEKFRDKMADIIKYMNKNNLDKQISKAIKGHMHLQYDRSYTEAAVLQDIPASIRTKISVNLYEQFIQKVPLFKGCSLGFIKQIAIRVHEEFFLPGEVIMEQGKVADQLYLVCHGELDEMRTEDGDKEELIRHLQNYCSFGEVSFLCNIPQPSMIRALEFCKVLRLDKHSFTEILKIYFVDGRVILNNLLEGKDSSLQHKLLESDFSLTIENHETEVAMRMNCAVYEGDLHLLKRLIGSGADPNKIDYDGRSPLHIAASKGYVDIACFLIEQGVVINVSDKFGNTPLLEAIKNGNDEVASLLADVGATLTIDNAGNFLCMTVAKKELDLLKKVLAYGINPNSRNYDQRTPLHIAASEGLCTMAESLLEAGASVLSKDRWGNTPLDEARTGGNRILIKMLEVAKISQLAELSNNVQETCDETPRKRCTVFPNHPWDQKADRREGLVLWVPQSIEELVKVAMKHLKSPSGSFILSEHGGKILDVGLISNDEKLFLELGLKDETLTALVPSYSIFLXIEVFAEELRKEGRQEVGSDSSMALQWMILTYVVAAEAAVAVLLTLPAPKLLKNRLVSLVSLILQPAFSVVPFAGFQLLDIYWKNEHRLTCTSEVCSAAERDRYEKSIYKAQRNVVLCAAACLLYWCIYRICKYQKEIQSLEEVEKRYKAQ 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0467 1019 ProSiteProfiles Ankyrin repeat profile. 604 636 IPR002110 GO:0005515
Bisa01g0467 1019 FunFam Potassium channel KAT2 415 551 - -
Bisa01g0467 1019 Gene3D - 107 353 - -
Bisa01g0467 1019 ProSiteProfiles cAMP/cGMP binding motif profile. 427 530 IPR000595 -
Bisa01g0467 1019 PRINTS EAG/ELK/ERG potassium channel family signature 251 261 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bisa01g0467 1019 PRINTS EAG/ELK/ERG potassium channel family signature 299 316 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bisa01g0467 1019 PRINTS EAG/ELK/ERG potassium channel family signature 510 518 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bisa01g0467 1019 PRINTS EAG/ELK/ERG potassium channel family signature 142 152 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bisa01g0467 1019 PRINTS EAG/ELK/ERG potassium channel family signature 343 352 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bisa01g0467 1019 MobiDBLite consensus disorder prediction 1 34 - -
Bisa01g0467 1019 SMART ANK_2a 637 666 IPR002110 GO:0005515
Bisa01g0467 1019 SMART ANK_2a 668 697 IPR002110 GO:0005515
Bisa01g0467 1019 SMART ANK_2a 571 600 IPR002110 GO:0005515
Bisa01g0467 1019 SMART ANK_2a 701 730 IPR002110 GO:0005515
Bisa01g0467 1019 SMART ANK_2a 604 633 IPR002110 GO:0005515
Bisa01g0467 1019 ProSiteProfiles KHA domain profile. 780 866 IPR021789 -
Bisa01g0467 1019 MobiDBLite consensus disorder prediction 1 19 - -
Bisa01g0467 1019 PANTHER POTASSIUM CHANNEL AKT1 57 849 IPR045319 GO:0005249|GO:0006813
Bisa01g0467 1019 SUPERFAMILY Voltage-gated potassium channels 104 352 - -
Bisa01g0467 1019 Gene3D - 661 779 IPR036770 -
Bisa01g0467 1019 Gene3D - 542 660 IPR036770 -
Bisa01g0467 1019 ProSiteProfiles Ankyrin repeat region circular profile. 701 733 - -
Bisa01g0467 1019 ProSiteProfiles Ankyrin repeat region circular profile. 637 668 - -
Bisa01g0467 1019 SMART cnmp_10 427 545 IPR000595 -
Bisa01g0467 1019 SUPERFAMILY cAMP-binding domain-like 355 544 IPR018490 -
Bisa01g0467 1019 ProSiteProfiles Ankyrin repeat profile. 637 669 IPR002110 GO:0005515
Bisa01g0467 1019 FunFam Potassium channel SKOR 107 352 - -
Bisa01g0467 1019 Pfam Ankyrin repeats (3 copies) 578 666 IPR002110 GO:0005515
Bisa01g0467 1019 SUPERFAMILY Ankyrin repeat 531 754 IPR036770 -
Bisa01g0467 1019 PRINTS Ankyrin repeat signature 717 731 IPR002110 GO:0005515
Bisa01g0467 1019 PRINTS Ankyrin repeat signature 605 620 IPR002110 GO:0005515
Bisa01g0467 1019 ProSiteProfiles Ankyrin repeat profile. 701 733 IPR002110 GO:0005515
Bisa01g0467 1019 Pfam Ankyrin repeats (many copies) 689 742 IPR002110 GO:0005515
Bisa01g0467 1019 CDD CAP_ED 427 541 IPR000595 -
Bisa01g0467 1019 Gene3D Jelly Rolls 415 535 IPR014710 -
Bisa01g0467 1019 Gene3D Helix hairpin bin 355 414 - -
Bisa01g0467 1019 ProSiteProfiles Ankyrin repeat region circular profile. 604 636 - -
Bisa01g0467 1019 Pfam Cyclic nucleotide-binding domain 447 531 IPR000595 -
Bisa01g0467 1019 Pfam KHA, dimerisation domain of potassium ion channel 779 848 IPR021789 -
Bisa01g0467 1019 Pfam Ion transport protein 107 352 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bisa01g0467 1019 Coils Coil 1006 1019 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0467 Bisa-ChrBisa01 6713187 6742500 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0467 647 816 Ion Channels AT5G37500 26.699 3.33e-06 49.3