Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0442 ATGTGTGGTGGTGCTATTATCTCCGACTACGTTTCTGAGAAGCGAAGCCGCAAATTGACCACCCAAGACCTATGGTCCGACCCCAATATTTTTTCTGATCTGCTTGGGTTCGACGCCTTTATGCACCATCCCAAACCCATCAACGATCAGAAACTCCCTCCTGTTACAGCCACCCCAGCAGTGGCATGTGGTGATGACGATAATACGTCGGAGAAGAAAAAGGAAGTAAAGAAACCCGAAAGGGCTCGCAAGAATGTGTACAGAGGCATCAGGCAAAGGCCATGGGGCAAGTGGGCCGCTGAGATAAGGGATCCACACAAAGGCGTCCGAGTCTGGCTCGGCACCTTCAATACTGCTGAAGAAGCCGCCCGAGCCTACGACAAAGCCGCCAAGCGCATCCGCGGCGACAAGGCCAAGCTCAACTTCCCTGTGTCTCAGCCTCACCCAGCTCAGCCTCAAGCTCCAGAGAGACCAGCTAAGAAGAAGCGCTGCCTCAGCCCCGAGCCGGGCCAGAAGCCGAGCCACCAACCGGCCACGGGGTTTCAATCTCGAAACGACTCCGTGGAGCTGAATCAGCAAATCTCGAGCCTGGAATCGTTCCTAGGTCTGGAGAGTAACAGTAACGAGTCGCAGGCGAGTGTAAGCGGGGGTGGACTCACCCAATGGGACCCGATGGAGATGTGGATGTTGGACGACGTCGTTATGCAGCATCTGCATAACTACAGCGTTTAA 732 0.5492 MCGGAIISDYVSEKRSRKLTTQDLWSDPNIFSDLLGFDAFMHHPKPINDQKLPPVTATPAVACGDDDNTSEKKKEVKKPERARKNVYRGIRQRPWGKWAAEIRDPHKGVRVWLGTFNTAEEAARAYDKAAKRIRGDKAKLNFPVSQPHPAQPQAPERPAKKKRCLSPEPGQKPSHQPATGFQSRNDSVELNQQISSLESFLGLESNSNESQASVSGGGLTQWDPMEMWMLDDVVMQHLHNYSV 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0442 243 SUPERFAMILY DNA-binding domain 86 145 IPR016177 GO:0003677
Bisa01g0442 243 PRINTS Ethylene responsive element binding protein signature 87 98 IPR001471 GO:0003700|GO:0006355
Bisa01g0442 243 PRINTS Ethylene responsive element binding protein signature 109 125 IPR001471 GO:0003700|GO:0006355
Bisa01g0442 243 PANTHER DNA-BINDING DOMAIN 69 192 IPR044808 GO:0003700|GO:0009873
Bisa01g0442 243 MobiDBLite consensus disorder prediction 60 82 - -
Bisa01g0442 243 ProSiteProfiles AP2/ERF domain profile. 86 143 IPR001471 GO:0003700|GO:0006355
Bisa01g0442 243 FunFam Ethylene-responsive transcription factor 2 85 144 - -
Bisa01g0442 243 Pfam AP2 domain 86 135 IPR001471 GO:0003700|GO:0006355
Bisa01g0442 243 Gene3D AP2/ERF domain 86 145 IPR036955 GO:0003700|GO:0006355
Bisa01g0442 243 SMART rav1_2 86 149 IPR001471 GO:0003700|GO:0006355
Bisa01g0442 243 MobiDBLite consensus disorder prediction 66 82 - -
Bisa01g0442 243 CDD AP2 87 145 IPR001471 GO:0003700|GO:0006355
Bisa01g0442 243 MobiDBLite consensus disorder prediction 138 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0442 Bisa-ChrBisa01 6315176 6316601 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0442 1 237 AP2-EREBP Transcription Factor Family AT3G16770 46.038 3.01e-55 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa01g0442 AP2 9.5e-15 CL0081