Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0439 ATGGCGACGGAGCAATTGATGTCCGGTGGCGGTCCCCGCTACGTTCAAATGCAATCGGAGCCATCGGCGGCGATGTCATCCGTTGCGTCGTTCCGGCAAGGTCCTGAGGCCACTCGAATTTTCGATGAGTTGCCTCAAGCCACCATCGTCTCCGTCTCTCGACCGGACCCCGGGGACATCAGTCCCATGCTTCTATCTTACACAATAGAGTTTCGGTATAAACAGTTCAAGTGGCAGTTAGTGAAGAAAGCTTCTCAAGTATTTTATTTGCATTTTACATTGAAGAAACGTGCCTTCATCGAGGAAATTCATGAGAAGCAAGAGCAGGTTAAAGAATGGCTTCACAATCTAGGAATAGGAGAAAATACTGCTATGGTGCAAGAAGATGATGAAGCTGATGATGAAACTGTTCAACTGCATCATGATGAAAGTGCTAAAGACAGAGATGTTCCATCTAGTGCTGCCCTACCAATTATACGGCCAGCCTTGGGAAGACAGGAGTCTGTATCAGAAAGAGCAAGGAATGCGATGCAAGGGTATCTGAATCACTTTTTGGGAAATATCAATATTGTTAACTCTCCAGAGGTTTGCAAGTTTTTGGAGGTATCAAAGTTATCTTTCTCACCTGAATATGGGCCTAACCTGAAGGAAGATTATGTGATGGTGAAGCATCTACCAAAAATTCCTAAGGATGATGATTCCAGAAAATGTTGTGCATCTAACTGTTTTAGTTGTTGTAATGACAACTGGCAAAAGGTTTGGGCTGTACTAAAACATGGATTCTTTGCATTGCTGGCTGATCCATTTGATAGCCAACCTTTGGATATTGTTGTTTTTGATGTACTACCTGCCTCAGATGGGAATGGGGATGGTCGTTTAGCACTAGCAAAGGAAGTGAAGGAACGAAATCCTTTACGTCACTCATTCAAGGTGACTTGTGGAAACCAGAGCATTAGGATAAGAGTAAAAAGTAGGAGTAAAGTTAAAGATTGGGTTGCTGCAATTAATGATGCTGGATTAAGGCCTCCTGAAGGCTGGTGTCATCCTCACCGCTATGGTTCATTTGCTCCACCAAGAGGCTTGATTGAAGATGGAAGTCAGGCCCAGTGGTTTGTAGATGGCCAAGCAGCATTTGAGGCCATTGCTTCTTCAATTGAGGATGCAAAATCAGAGATATTTATTTGTGGGTGGTGGGTGTGCCCAGAATTGTATTTACGACGTCCCTTTCACACCCATGCTTCATCAAGGCTTGATAATTTGCTGGAAGCAAAAGCTAAGCAAGGGGTTCAGATTTACATTCTTATTTACAAAGAGGTGGCTCTTGCTTTGAAAATCAACAGTGTCTATAGCAAGAGAAAGCTTCTTAGCATTCATGAAAACGTGAGGGTATTACGCTATCCTGACCACTTTTCTTCTGGTGTTTACCTGTGGTCACACCACGAAAAGCTGGTCATTGTTGATCACCAGATTTGTTTTATTGGAGGACTGGATCTATGCTTTGGTCGTTATGACACATCTGAACACAATGTGGGAGATGTCCCTCCTTCGATCTGGCCAGGAAAGGACTATTATAACCCTAGGGAATCTGAACCAAATTCATGGGAAGATACAATGAAAGATGAATTGGATCGTCTAAAGTACCCTCGAATGCCTTGGCACGATGTTCATTGTTCCCTTTGGGGACCACCATGTCGTGACATTGCTAGGCATTTTGTTCAGCGATGGAATTATGCAAAGAGGAACAAAGCTCCATATGAGCAAGCAATACCGTTACTTATGCCTCAGCATCATATGGTTATCCCACACTATTCGGGAAGAAGCAAAGAGATGGATACTGAAAGTGACAATACTGACAATCATATAGGCATTCAGAGGCAAGATTCCTTTTCCTCGTCATCCCAAGATATTCCTCTACTTCCTCAAGACTCTGATGCGCTGGATACTCCTGAAGGGGACTCAAAATCAAAGGAGTTTTCCTTTTCGGATGACCTTGACCGGCCAAGCAGGGTCAGCAGTGGTCATCCTTTCTCTTTCCGGAAGGCCAAAATTGAACCTGTAGGTCCAGATACACCTATGAAGGGCTTTGTTGATGATCTTGATGTTGCAGACTGCCATGGAAAGAGGCCTGTGGATAGAGTGGCTCATGTTGGTATACATAATTCAGGTCCAGAATGGTGGGAAACACAAGAACGGAGTGACCATAGAAGTTTTGCAGATGAATCTGGACAAGTGGGTCCTCATGCTTCCTGCCGTTGTCAGGTTATTCGGAGTGTCAGCCAATGGTCTGCTGGAACAAGCCAAACGGAAGATAGCATCCACAATGCTTATTGCTCGCTTATTGAGAAGGCAGAACACTTCATCTACATTGAGAATCAATTTTTTATCTCAGGTCTTTCAGGAGATGAAATGATACGAAATCGTGTTTTAGAAGCTTTATATCGACGGATTATGCGAGCTTACCATGACAAAAAAACATTTAGGGTTATAATTATCATACCACTCCTGCCTGGCTTCCAGGGAGGCCTGGATGATAGTGGTGCAGCATCTGTTAGAGCCATAATGCATTGGCAGTATCGAACCATTTGCAGAGGACAGAATTCCATATTACATAATCTATTAGATCTTCTTGGTCCAAAACTACATGATTATATCTCTTTCTATGGCCTTAGGGCTTACGGTAGACTCTTTGTTGGCGGTCCTGTGGCAACTAGCCAGGTGTATGTTCACAGTAAAATCATGATCATTGATGACTGTACAACTTTAATTGGATCTGCTAATATTAATGATAGGAGTTTACTTGGCTCCAGAGATTCTGAGATCGGGGTAATTATAGAAGACAGAGAGTTGATTGATTCATACATGGGTGGAAAATCATGGAAAGCAGGAAAGTTCTCTCTGACTCTCCGGTTGTCATTATGGTCTGAACACTTGGGTCTTTCAACTGGACAGATCAATAAAATAATGGATCCAATCGCTGAGTCTACTTATAAGGATATTTGGATGGCAACAGCAAAGACAAATACTACAATTTACCAGGATGTATTTTCTTGCGTACCTAATGATCTGATACACACAAGACTCGCTTTCAGACAAAGCACAACATTCTGGAAAGAAAAAATTGGCCATACTACTATTGATTTAGGAATAGCCCCAGAAAAATTAGAATCCTATCATAATGAAGGTGTCAAGAAAACTGATCCTTTGGATAGATTAGCATCAGTGAAGGGTCATCTTGTTTCCTTTCCCTTGGAGTTCATGTGTCAAGAAAATCTGAGACCTGCTTTTAATGAAAGCGAATACTATGCAACTCAAGTTTTCCATTGA 3324 0.4245 MATEQLMSGGGPRYVQMQSEPSAAMSSVASFRQGPEATRIFDELPQATIVSVSRPDPGDISPMLLSYTIEFRYKQFKWQLVKKASQVFYLHFTLKKRAFIEEIHEKQEQVKEWLHNLGIGENTAMVQEDDEADDETVQLHHDESAKDRDVPSSAALPIIRPALGRQESVSERARNAMQGYLNHFLGNINIVNSPEVCKFLEVSKLSFSPEYGPNLKEDYVMVKHLPKIPKDDDSRKCCASNCFSCCNDNWQKVWAVLKHGFFALLADPFDSQPLDIVVFDVLPASDGNGDGRLALAKEVKERNPLRHSFKVTCGNQSIRIRVKSRSKVKDWVAAINDAGLRPPEGWCHPHRYGSFAPPRGLIEDGSQAQWFVDGQAAFEAIASSIEDAKSEIFICGWWVCPELYLRRPFHTHASSRLDNLLEAKAKQGVQIYILIYKEVALALKINSVYSKRKLLSIHENVRVLRYPDHFSSGVYLWSHHEKLVIVDHQICFIGGLDLCFGRYDTSEHNVGDVPPSIWPGKDYYNPRESEPNSWEDTMKDELDRLKYPRMPWHDVHCSLWGPPCRDIARHFVQRWNYAKRNKAPYEQAIPLLMPQHHMVIPHYSGRSKEMDTESDNTDNHIGIQRQDSFSSSSQDIPLLPQDSDALDTPEGDSKSKEFSFSDDLDRPSRVSSGHPFSFRKAKIEPVGPDTPMKGFVDDLDVADCHGKRPVDRVAHVGIHNSGPEWWETQERSDHRSFADESGQVGPHASCRCQVIRSVSQWSAGTSQTEDSIHNAYCSLIEKAEHFIYIENQFFISGLSGDEMIRNRVLEALYRRIMRAYHDKKTFRVIIIIPLLPGFQGGLDDSGAASVRAIMHWQYRTICRGQNSILHNLLDLLGPKLHDYISFYGLRAYGRLFVGGPVATSQVYVHSKIMIIDDCTTLIGSANINDRSLLGSRDSEIGVIIEDRELIDSYMGGKSWKAGKFSLTLRLSLWSEHLGLSTGQINKIMDPIAESTYKDIWMATAKTNTTIYQDVFSCVPNDLIHTRLAFRQSTTFWKEKIGHTTIDLGIAPEKLESYHNEGVKKTDPLDRLASVKGHLVSFPLEFMCQENLRPAFNESEYYATQVFH 1107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0439 1107 CDD PH_PLD 191 338 - -
Bisa01g0439 1107 PANTHER PHOSPHOLIPASE D 162 1097 IPR015679 -
Bisa01g0439 1107 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 904 931 IPR001736 GO:0003824
Bisa01g0439 1107 Pfam Phospholipase D Active site motif 475 502 IPR001736 GO:0003824
Bisa01g0439 1107 MobiDBLite consensus disorder prediction 606 676 - -
Bisa01g0439 1107 FunFam Phospholipase 738 958 - -
Bisa01g0439 1107 CDD PLDc_vPLD1_2_yPLD_like_1 368 513 - -
Bisa01g0439 1107 SUPERFAMILY Phospholipase D/nuclease 743 953 - -
Bisa01g0439 1107 Gene3D - 239 341 IPR011993 -
Bisa01g0439 1107 MobiDBLite consensus disorder prediction 621 639 - -
Bisa01g0439 1107 Gene3D Endonuclease Chain A 361 609 - -
Bisa01g0439 1107 MobiDBLite consensus disorder prediction 606 620 - -
Bisa01g0439 1107 Pfam PLD-like domain 777 953 IPR025202 -
Bisa01g0439 1107 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 475 502 IPR001736 GO:0003824
Bisa01g0439 1107 SMART pld_4 475 502 IPR001736 GO:0003824
Bisa01g0439 1107 SMART pld_4 904 931 IPR001736 GO:0003824
Bisa01g0439 1107 MobiDBLite consensus disorder prediction 647 669 - -
Bisa01g0439 1107 CDD PLDc_vPLD1_2_yPLD_like_2 764 948 - -
Bisa01g0439 1107 PIRSF PLD_euk 603 1107 IPR016555 GO:0004630|GO:0006654|GO:0048017
Bisa01g0439 1107 PIRSF PLD_euk 45 636 IPR016555 GO:0004630|GO:0006654|GO:0048017
Bisa01g0439 1107 Gene3D Endonuclease Chain A 700 965 - -
Bisa01g0439 1107 SUPERFAMILY PH domain-like 246 338 - -
Bisa01g0439 1107 SUPERFAMILY Phospholipase D/nuclease 320 595 - -
Bisa01g0439 1107 SMART PH_update 214 342 IPR001849 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0439 Bisa-ChrBisa01 6228360 6240800 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0439 1 988 Phospholipase D Gene Family (Wang group) AT3G16785 73.046 0.0 1399