Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0432 ATGATATCACCTGCCCATACTTTGATTACTTGGGCGTTTCGTGCCCATACCTTTATGCCGTTCTCCCTTTCTCAAACTCTAGGATACGCCCTTTGTGAACCTTCATTTGTATTGCAACTTCTTCTAGCTGCTCTTTCGCTTCCGAAGATGGGTTCAACAGATATCAGGGACATTTTGACAGCGTTTAGTCCTTCTTCAGACTTGTTTGCTATCAGCGCTGGAGATGGTCGCGTGAAGATATGGGATACACTAAAGGGTCAGGTCCAGACTGAGTTTGCAGACATCACATCAACTGATGCAGCAAGTATATATGGTAGTTCCATAAAGGGGCATCTTTCAATAGATTATACATGCATGAAGTGGTTGTCATTGGCAAGAAAGAAAAAAAGGAAACAAGCATCCTCATTGTTAGTACTTGGAACAGGTAGTGGTGATATTTTAGCACTTGATGTGTCTGCTGGTCAATTGAATTGGAGAATTAGTGATTGCCATCCTGGAGGTGTGAGAGCCATATCATCTTCTGCAAATGCATCATGTATTTATACTGCTGGTGCAGATGGAATGATTTGCAGGATTGATTGCATGTCAGGAAATCTGTTGGAGAAATTCAAAGCTTCGACAAAGGCAATATCATGCATGTCTGTTTCTTCAGATGGGAAGATAATAGCTACTGCAGCATCAGAATTAAAGATTTTTAATTGCTCCGATCACAAAAAGATAAAAAAGTTCACTGGTCATCCTGGATCTGTAAGGTGTATAGTCTTCACTGAAGATGGGAAGTATATTCTATCCTCTGCTGTTGGTGAAAGATATGTTGCTGTGTGGAGGATAGATGGTGCCAAAAAGAAGTCAGCTAGTTGTGTTCTTGCAATGGAGCATCCTGCTGTCTTTCTTGATAGCAGGTGCACTCCTAGTAGGGAACTTGACGAGGCTGATGTATGTGTTTTGGCTATCTCAGAAGTTGGTGATTGTTATGTCTGGTTTGGAAATAGTTTTGAGGAACTACGTAATGCAAAGCCCACTAAAATATCATTGTCTTTGGAACACATGCCCTCCAGAAATGACATGAGGGCATTGCCAGCAATATATGCTGCAAAATTCCAAGGGCTTCACAAGCCACCCTCTGGGCAGCTTTTCCTTGTTTATGGGTTGCTTGTAAAACCATCATTTCAGAAAATTACGGTGCAAGCTGGCTCAGACATAAAGTTGAATGTCTCCAATGATGGTATTCTTCTTCCGATGAAGCAATCTCTCACTAAGAAGGGAACAGATGTAAAAAAAGTTACTGCACTAGACCGTGCTAATGCAGAGGATGCCTTACTTCCAATTCCTAAGATTTTCGATTCTCATGAGAAAGAGAAAGCAGTCCAAGACTCTTTGGACAAGGACGTTGTAGATGACCTTGTTAGAAGAAGTAGTGAAGCTGATTCTCTTGGCATTGAAGATGAGATGGCCCCAGGTGAGATTGATGTAATATGCATGGAAGACCGGATGAGATCACTGGGGATACTTGATGGTGAAAATGATCTTGAATCAAATATCAAATCTTGTTCTACATTGTTGAAGGGTGTTGATCTTGAAGCTACTCTTCCAATGAAAAAGATAAGAGCAAAGGTTTTGTCTATGGGGCCAGGCAAAGCATGCAAGCTACTGGAAGTGTTGCTAGCTGCATGGCAATCAAGGTCATCTGTTGGAAAGTATGCTCTTCCGTGGATTTATAGCATATTAGTGAATCATGGTCACTATGTCATTTCTCAGGAACATGTGACACAGATTACTAGCTCTAGAGGGTCTGCTCTTCAGACTTTGTTGCAATTATCAGGTCGTCTGCAATTGGTGACAACACAGATTAACAAGGCTTCTCAAAATACGAGTCATTCAGTGCGTGATGTCGAAATGGAAGAAAGAGAAGATGAGGATGAAGATGAGTATTTTCAAGAGGAAGGAGATGATGCATCTGAAATAAGTAGTGATGATGAGAGCTAATACCGCTTGCTGCCGTCACCCCTCGCTGCGCTACTGTCTCCTCTAACCTCGCCGATGTCTCAATCGTTTTGCTCGCCTAGTGGCGACGACAGTAGTGAACTAGTTAGGGGTGGGGCCACGGCCACTATACCAGAGATTTCCAACTTGAGCGAAGACTGA 2145 0.4238 MISPAHTLITWAFRAHTFMPFSLSQTLGYALCEPSFVLQLLLAALSLPKMGSTDIRDILTAFSPSSDLFAISAGDGRVKIWDTLKGQVQTEFADITSTDAASIYGSSIKGHLSIDYTCMKWLSLARKKKRKQASSLLVLGTGSGDILALDVSAGQLNWRISDCHPGGVRAISSSANASCIYTAGADGMICRIDCMSGNLLEKFKASTKAISCMSVSSDGKIIATAASELKIFNCSDHKKIKKFTGHPGSVRCIVFTEDGKYILSSAVGERYVAVWRIDGAKKKSASCVLAMEHPAVFLDSRCTPSRELDEADVCVLAISEVGDCYVWFGNSFEELRNAKPTKISLSLEHMPSRNDMRALPAIYAAKFQGLHKPPSGQLFLVYGLLVKPSFQKITVQAGSDIKLNVSNDGILLPMKQSLTKKGTDVKKVTALDRANAEDALLPIPKIFDSHEKEKAVQDSLDKDVVDDLVRRSSEADSLGIEDEMAPGEIDVICMEDRMRSLGILDGENDLESNIKSCSTLLKGVDLEATLPMKKIRAKVLSMGPGKACKLLEVLLAAWQSRSSVGKYALPWIYSILVNHGHYVISQEHVTQITSSRGSALQTLLQLSGRLQLVTTQINKASQNTSHSVRDVEMEEREDEDEDEYFQEEGDDASEISSDDESXYRLLPSPLAALLSPLTSPMSQSFCSPSGDDSSELVRGGATATIPEISNLSED 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0432 714 SMART WD40_4 38 82 IPR001680 GO:0005515
Bisa01g0432 714 SMART WD40_4 153 193 IPR001680 GO:0005515
Bisa01g0432 714 SMART WD40_4 236 276 IPR001680 GO:0005515
Bisa01g0432 714 SMART WD40_4 196 233 IPR001680 GO:0005515
Bisa01g0432 714 MobiDBLite consensus disorder prediction 677 691 - -
Bisa01g0432 714 Pfam WD domain, G-beta repeat 55 82 IPR001680 GO:0005515
Bisa01g0432 714 Pfam WD domain, G-beta repeat 239 275 IPR001680 GO:0005515
Bisa01g0432 714 Gene3D - 192 327 IPR015943 GO:0005515
Bisa01g0432 714 Gene3D - 50 191 IPR015943 GO:0005515
Bisa01g0432 714 PANTHER OS03G0300300 PROTEIN 52 660 - -
Bisa01g0432 714 MobiDBLite consensus disorder prediction 677 714 - -
Bisa01g0432 714 ProSiteProfiles Trp-Asp (WD) repeats profile. 243 285 IPR001680 GO:0005515
Bisa01g0432 714 MobiDBLite consensus disorder prediction 621 662 - -
Bisa01g0432 714 ProSiteProfiles Trp-Asp (WD) repeats profile. 61 91 IPR001680 GO:0005515
Bisa01g0432 714 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 61 279 IPR011047 -
Bisa01g0432 714 MobiDBLite consensus disorder prediction 634 656 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0432 164 275 U-box Gene Family AT2G33340 29.310 3.78e-08 54.7