Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0425 ATGAATCTGAGCAACGGCAAGGGATCCATGTCAACGGCTAGTTCCAGTGCAGCTTTGAAGTCCGCCGACATCGTCTCCGACCAGTTTCCGGTGGGTCTCCGGGTACTGGTAGTGGACGATGATCCCACATGCCTCATGATCCTTGAGAAGATGCTTCGCACTTGCCTATACGAAGTTACAAAATGCAATCGAGCAGAGATTGCATTGTCACTTCTGAGAGAGAACAAAAATGGGTTCGACATTGTTATAAGCGATGTACATATGCCAGACATGGATGGCTTCAAACTCTTGGAGCACATTGGGTTAGAGATGGACCTTCCAGTTATTATGATGTCAGCAGATGATGGAAAGAATGTTGTTATGAAAGGGGTAACTCATGGTGCTTGCGATTACCTTATAAAACCTGTGCGCATTGAGGCTTTGAAGAATATATGGCAGCATGTGATTCGAAAGAGAAAGAATGAGTGGAAGGATTTGGAGCAATCGGGTAGTGCAGAAGAAGGAGATCGACAACAAAAGGCAAATGATGAGGCGGATTACTCATCCTCTGCAAATGAAGGCAATTGGAGAAACACAAAGAAGAGGAAGGATGAAGAAGAAGAAGTAGAGGAGAGGGATGACTCTTCCACGTTAAAGAAACCGCGAGTTGTTTGGTCAGTTGAGCTCCATCAACAGTTTGTTGGTGCTGTGAATCATCTCGGAATTGACAAGGCTGTTCCTAAAAAAATTCTGGAATTGATGAATGTTCCTGGGCTCACTAGAGAAAATGTTGCCAGCCACCTGCAGAAATACCGTTTGTATCTTCGAAGGCTGAGTGGAGTTTCTCAACACCAGACTAACTTGAACAACTCTTTCATCAGCTCACAGGAAACTTTTGGGGCAATCTCTTCACTTAATGGAATTGATCTTCAAACTCTTGCGGCCACGGGCCAGCTTCCGGCACAAAGCCTGGCAACACTTCAAGTAGCAGGACTTGGCAGATCAACTGCAAAAGCTGGCCTACCCATGCCCCTTGTTGATCAAAGGAACCTTTTCAGTTTTGAAAACCCAAGATTAAGATTTGGAGAAGGGCAACAGCAACATGTGAGCAGTAGTAAACCAATGAATTTACTTCATGGTATCCCTACAAACATGGAGCCAAAGCAGCTTGCTAATTTGCACCAATCTACTCAATCACTAGGCAGCTTGAATATGCGAGTCAATGCTTCTCCTGCACAGAGCAACCCCCTATTGGTGCAGATGTCTCAACCACAACCAAGAGGTCATATGCTGACTGAAAATACTGTTTCTCATGTTCCCAGACTTCCAACATCTATTGGGCAGTCTACCGTACCAAACGGAACCCCAAATGGTGTTCTGGCCAGAAATGGGATTGCTGATAGTAACCGAGGAGCTGCATACAATCCAGTTCCACAAACCTCCTCAATGTTGAATTTTCCTGTGAACCAAACCACAGAAATCTCGGCAAGTAGTTTTCCTCTTGGAAGCACTCCGGGTATATCAAGTATTACAACAAAAGGAACATATCAAGATGGAGTTGCTTCAGGGATCAAAGGATCTTCTGGATTTGTTCCAAGTTATGATATCTTTAATGAATTACACCAGCAGAAGTCCCATGATTGGGAGATACAAAACTTGGGCCTACCATATAACTCCTCTCAGCATGCAAATCCTTTACAAGGCAACGTTGATGTCTCACCATCAGTTTTAGTCCATCAGGGTTTCTCTTCTACCCAACAGACTGGACAGAATAGAGATGCTACTTCAATTGAAAAAGCCATGTTTTCCCTGGGGGAAAGCCTGCAACCAGGTAACTTCCAAAATATCGGTCAGCATCAGGGTTTCCAAAATACCCTTCTTGCTGATAATTCTGTTAGGGTTAAGACTGAAAGAATTCCTGATGCAAGCTCTCAGACAAACCTGTTCCCTGAGCATTATGGCCAGGAGGATCTTATGAGTGCGCTTCTTAAACAGCAAGAAGGCATTGGACCAGCTGAGAATGAGTTTGACTTTGATGGATATTCCTTGGATAACATTCCTGTCTAG 2046 0.4423 MNLSNGKGSMSTASSSAALKSADIVSDQFPVGLRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAEIALSLLRENKNGFDIVISDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDGKNVVMKGVTHGACDYLIKPVRIEALKNIWQHVIRKRKNEWKDLEQSGSAEEGDRQQKANDEADYSSSANEGNWRNTKKRKDEEEEVEERDDSSTLKKPRVVWSVELHQQFVGAVNHLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSQHQTNLNNSFISSQETFGAISSLNGIDLQTLAATGQLPAQSLATLQVAGLGRSTAKAGLPMPLVDQRNLFSFENPRLRFGEGQQQHVSSSKPMNLLHGIPTNMEPKQLANLHQSTQSLGSLNMRVNASPAQSNPLLVQMSQPQPRGHMLTENTVSHVPRLPTSIGQSTVPNGTPNGVLARNGIADSNRGAAYNPVPQTSSMLNFPVNQTTEISASSFPLGSTPGISSITTKGTYQDGVASGIKGSSGFVPSYDIFNELHQQKSHDWEIQNLGLPYNSSQHANPLQGNVDVSPSVLVHQGFSSTQQTGQNRDATSIEKAMFSLGESLQPGNFQNIGQHQGFQNTLLADNSVRVKTERIPDASSQTNLFPEHYGQEDLMSALLKQQEGIGPAENEFDFDGYSLDNIPV 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0425 681 MobiDBLite consensus disorder prediction 159 176 - -
Bisa01g0425 681 MobiDBLite consensus disorder prediction 159 208 - -
Bisa01g0425 681 Pfam Myb-like DNA-binding domain 215 265 IPR001005 -
Bisa01g0425 681 Gene3D - 33 171 - -
Bisa01g0425 681 PANTHER TWO-COMPONENT RESPONSE REGULATOR 33 384 IPR045279 GO:0009736
Bisa01g0425 681 FunFam Two-component response regulator 33 170 - -
Bisa01g0425 681 Gene3D - 210 272 - -
Bisa01g0425 681 MobiDBLite consensus disorder prediction 189 208 - -
Bisa01g0425 681 ProSiteProfiles Response regulatory domain profile. 34 149 IPR001789 GO:0000160
Bisa01g0425 681 CDD REC_typeB_ARR-like 35 149 - -
Bisa01g0425 681 SMART REC_2 33 145 IPR001789 GO:0000160
Bisa01g0425 681 FunFam Two-component response regulator 209 272 - -
Bisa01g0425 681 Pfam Response regulator receiver domain 35 143 IPR001789 GO:0000160
Bisa01g0425 681 NCBIfam myb-like DNA-binding domain, SHAQKYF class 213 266 IPR006447 GO:0003677
Bisa01g0425 681 SUPERFAMILY Homeodomain-like 210 270 IPR009057 -
Bisa01g0425 681 PIRSF RR_ARR_type-B 7 673 IPR017053 GO:0003677|GO:0003700|GO:0009736
Bisa01g0425 681 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 212 269 IPR017930 -
Bisa01g0425 681 SUPERFAMILY CheY-like 32 156 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0425 Bisa-ChrBisa01 5957271 5960533 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0425 67 681 Response Regulator Gene Family AT3G16857 49.540 0.0 530
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Bisa01g0425 Response_reg 1e-22 CL0304