Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0421 ATGGTTGATCCGAGTGGAAAAGGATCAGAGGCCGAGGACGTCAATAGCAGAAACCCAAACGGTGATTCCTCAGAGGACAGCCCAATGAATAACGAGCACAAGAAGACATGCGCCGATTGTGGCACATCCAAGACCCCTCTCTGGAGAGGCGGTCCGGCTGGCCCCAAGTCATTATGCAACGCTTGTGGGATCAGAAGCAGGAAGAAGAAAAGAGCGATTCTGGGTATGAACAAAGGAAGCGCAGAAGATAAGAAAGGCAAAAGAAGCAACAATAATAACAAGATTGGAGATAGTTTGAAGCAGAGATTAATGGCTTTGGGGAGGGAGGTTTTGATGCAGAGATCAACGGTGGAGAGGCAGAGGAAGAAGCTGGGAGAGGAAGAACAAGCGGCTGTGTTGTTGATGGCTCTGTCTTATGGCTCCGTCTCTGCTTAA 435 0.492 MVDPSGKGSEAEDVNSRNPNGDSSEDSPMNNEHKKTCADCGTSKTPLWRGGPAGPKSLCNACGIRSRKKKRAILGMNKGSAEDKKGKRSNNNNKIGDSLKQRLMALGREVLMQRSTVERQRKKLGEEEQAAVLLMALSYGSVSA 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0421 144 MobiDBLite consensus disorder prediction 75 91 - -
Bisa01g0421 144 Gene3D - 31 96 IPR013088 GO:0006355|GO:0008270
Bisa01g0421 144 ProSiteProfiles GATA-type zinc finger domain profile. 31 67 IPR000679 GO:0006355|GO:0043565
Bisa01g0421 144 MobiDBLite consensus disorder prediction 70 97 - -
Bisa01g0421 144 SMART GATA_3 31 81 IPR000679 GO:0006355|GO:0043565
Bisa01g0421 144 MobiDBLite consensus disorder prediction 11 26 - -
Bisa01g0421 144 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 29 71 - -
Bisa01g0421 144 Pfam GATA zinc finger 37 71 IPR000679 GO:0006355|GO:0043565
Bisa01g0421 144 MobiDBLite consensus disorder prediction 1 55 - -
Bisa01g0421 144 CDD ZnF_GATA 36 94 IPR000679 GO:0006355|GO:0043565
Bisa01g0421 144 PANTHER OS01G0976800 PROTEIN 7 142 - -
Bisa01g0421 144 ProSitePatterns GATA-type zinc finger domain. 37 62 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0421 Bisa-ChrBisa01 5902788 5903422 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0421 1 141 C2C2-Gata Transcription Factor Family AT3G06740 61.745 1.38e-55 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Bisa01g0421 GATA 1.4e-16 CL0167