Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0420 ATGAGTGCATCAGAAAACCCTAACCCTCATCCTAACTCTGATCGCAACAAGAACAAACCTTCCTCCTTCTCTTCCTCTTCCTCTTCCTCTTCCTCTTCCTCTTCATCAACTAATTTGAAGCTATTTGGTTTCCCTATAAGGGCCAGTGATGATATGATTATCCCTTTTGAGGGCAATAAGAGATTCAAATGCCATTTTTGTCACAGGGCATTCTCCAATTCTCAAGCCCTGGGAGGCCACCAAAACGCTCACAAGAAACAACGCCTACAGGCTACCCTTATTCCCCATTTCAACCCCCTTATGCTTCCCCTTCATCTTCATCATCAACGGCTCACAAACACACCCTCACTTCCCACACCTTCATCAGGACCGTCCCTTCTTCATCATGCATGGGCACCACAATCATCTCAGCCCTCAAATCCAGTTCAATCCAACGAGGGAGACCCACCTGCCAAAAAGCAGGAGCCCTTCATCAATGCACAAGTACAGAATGGTGATGATGATAATCATGTGGATCTTAACTTGAGTCTTGCTAGCATGCCCTCTAACTCCATCGACTAG 561 0.4635 MSASENPNPHPNSDRNKNKPSSFSSSSSSSSSSSSSTNLKLFGFPIRASDDMIIPFEGNKRFKCHFCHRAFSNSQALGGHQNAHKKQRLQATLIPHFNPLMLPLHLHHQRLTNTPSLPTPSSGPSLLHHAWAPQSSQPSNPVQSNEGDPPAKKQEPFINAQVQNGDDDNHVDLNLSLASMPSNSID 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0420 186 ProSiteProfiles Zinc finger C2H2 type domain profile. 62 89 IPR013087 -
Bisa01g0420 186 MobiDBLite consensus disorder prediction 111 147 - -
Bisa01g0420 186 MobiDBLite consensus disorder prediction 1 38 - -
Bisa01g0420 186 ProSitePatterns Zinc finger C2H2 type domain signature. 64 84 IPR013087 -
Bisa01g0420 186 MobiDBLite consensus disorder prediction 157 186 - -
Bisa01g0420 186 SUPERFAMILY beta-beta-alpha zinc fingers 58 89 IPR036236 -
Bisa01g0420 186 Gene3D Classic Zinc Finger 52 93 - -
Bisa01g0420 186 PANTHER ZINC FINGER PROTEIN 5 19 179 IPR044299 GO:0010090
Bisa01g0420 186 MobiDBLite consensus disorder prediction 111 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0420 Bisa-ChrBisa01 5853137 5853697 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0420 39 91 C2H2 Transcription Factor Family AT5G06650 45.455 2.19e-11 58.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bisa01g0420 None None None