Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0418 ATGGGAAGAGCTCCATGCTGTGAGAAAGTGGGGTTGAAGAAAGGAAGATGGACAGCTGAAGAGGATCACATTTTGACGCAGTACATCCAACTGCATGGTGAAGGCTCTTGGAGATCCTTGCCCAAGAATGCTGGACTGTTAAGGTGTGGGAAGAGTTGCAGACTGAGATGGATAAACTACTTGAGAGCAGACGTGAAGAGAGGAAACATAACTCCTCAAGAAGAAGAGCTCATTGTGAAGCTGCATGCTGCTCTGGGAAATAGGTCTGCATATATTCGCTTCCCTCTATCTCTCCTTCATTCTATGAAAATTGAAAATAAAAAACCTTTCTGTTTTAGGTGGTCTGTGATCGCCGGACATTTACCTGGACGAACGGATAATGAAATAAAGAATTATTGGAACTCTCATCTAAGGCGAAAAATCTACTGCTTCATGAAGTCCCTGAACGAGTCCTTATCTCCCACTCACATGGCTACCATCAACCAAATAGCCGCTTCCTCCAAACGAAGAGGTGGTCGAACCAGACCTCCTCAACCTCAACCATCCCACAACCCCATTCCTTTGACCCACAAGAACTCCCACAAAACATCTCAAACAAAACCACAAGATGCTGCTATAGAAGCTCCAAGCATTAACAATGGAGGAGGAGAAGACTTGGGACTATACCAGTGGCTAGACAATGAAGTAACGGAGCTCAGTTATATGTTTGAGAATGAGGTGATGGTGAACCCAAGTGAAAACAGTAATGCAGCCAATGAGGAGAATCTCATGAGTTGCAGAAACAGTAAAGTTATGGGTATGGGGGGAGATTTGTATGAGTTAGTGGGAAAGGAGATAATGGGAATTACAAGTGAGGATAGTGAAGTTTGGAGATCATCAAATGCAGAATTAAGTGGGGAAGTATATAATGGTTGTGATTCATCGGAGGGCTCTGTTTATGACTATCAGTGGCAAGATTTTGATTGGGATTTATTGGAAGGTTGTTTTCAACCTTATAATAATCAATGGGGCATTCTTGAAGAAGGTGACCTGTTTGCGGGGTAA 1044 0.432 MGRAPCCEKVGLKKGRWTAEEDHILTQYIQLHGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADVKRGNITPQEEELIVKLHAALGNRSAYIRFPLSLLHSMKIENKKPFCFRWSVIAGHLPGRTDNEIKNYWNSHLRRKIYCFMKSLNESLSPTHMATINQIAASSKRRGGRTRPPQPQPSHNPIPLTHKNSHKTSQTKPQDAAIEAPSINNGGGEDLGLYQWLDNEVTELSYMFENEVMVNPSENSNAANEENLMSCRNSKVMGMGGDLYELVGKEIMGITSEDSEVWRSSNAELSGEVYNGCDSSEGSVYDYQWQDFDWDLLEGCFQPYNNQWGILEEGDLFAG 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0418 347 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 233 - -
Bisa01g0418 347 SUPERFAMILY Homeodomain-like 14 138 IPR009057 -
Bisa01g0418 347 ProSiteProfiles Myb-like domain profile. 62 137 IPR001005 -
Bisa01g0418 347 CDD SANT 16 61 IPR001005 -
Bisa01g0418 347 Gene3D - 71 141 - -
Bisa01g0418 347 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Bisa01g0418 347 MobiDBLite consensus disorder prediction 185 206 - -
Bisa01g0418 347 Pfam Myb-like DNA-binding domain 67 137 IPR001005 -
Bisa01g0418 347 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bisa01g0418 347 SMART sant 66 139 IPR001005 -
Bisa01g0418 347 SMART sant 13 63 IPR001005 -
Bisa01g0418 347 MobiDBLite consensus disorder prediction 164 212 - -
Bisa01g0418 347 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bisa01g0418 347 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 113 141 IPR017930 -
Bisa01g0418 347 FunFam Myb transcription factor 11 67 - -
Bisa01g0418 347 Gene3D - 11 67 - -
Bisa01g0418 347 CDD SANT 71 137 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0418 Bisa-ChrBisa01 5833478 5835948 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0418 1 232 MYB Transcription Factor Family AT5G49330 50.204 3.70e-69 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa01g0418 Myb_DNA-binding 1.7e-10 CL0123