Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0409 ATGATGGCAAATAACTTAACGGGGGAGCTCCTGGGTTCAGAGATACATGGATTCCATTCATTGCAAGGGTTGGATGTTGGAAACATTATGGAGGAAGCAAGAAGCAGATGGCTTCGTCCCAATGAGATTTATGCCATACTCTGTAATTACAAGTATTTCACCATCCATGTCAAGCCACTGAATTTGCCCAAAAGTGGTACTATTGTATTATTTGACAGGAAGATGCTCAGGAACTTTCGTAAAGATGGGCACAATTGGAAAAAGAAAAAGGATGGGAAAACTGTTAAAGAAGCTCATGAACACTTAAAAGTTGGCAATGAAGAAAGGATCCATGTATACTATGCACATGGCCAAGACAACCCAAGCTTTGTTCGCAGATGTTATTGGCTGCTTGATAAGAGTCTGGACCATATAGTCCTTGTTCATTATCGCGAAACACAAGAGCTGCAAGGTTCTCCAGTGACACCTGTATATTCAAATTCTAGTCATGCCTCTGAGCCAACCACACCGTGTATTCTATCAGAAGAATTAGATTCTGAGATCAACAAGGCATATGCTGGTGAGCTAAATGACAATTTATCAGTCAAAAGTCATGAACTGAGGCTTCATGAGATTAATACACTTGAATGGGATGACCTGGTAGTTACAAATGATCTTAACACCTCTACTACTTCTACTCCTACTGGAGGAAATATACCATGTTTTCATCAAGAAAAGCAAATCTTACTGAATGGAACTTCAAGCAAGGTAGCTAACAATCCATCTGCAGAAATTCAGTCTTTTGATATTTTAAGCAATCCTATTGATGGGAGCAATAGTGCTCCTTACAATTTTCCTGAAAGTTCGAATCTTCAGTCAAGTTACAGTCAAGTAAATTCAAATGTGCAGATGGGACAGCCTAACACTGTTGGTGGTGCTAGTTATGTGGACATTATTATCAATGATAATCTGCAAAGCCAGGACAGCTTTGGAAAATGGATAAACGATATCATTTCTGATTCACCGTGTTCTGTAGATGACTCAGGTCTTGAATCCTCGGTTTCATCTGTTCAGGATTCACATTCTCCATTAGTGGATCATCATCAATCTTCTCTGCCAGAACAAGTATTCAATATCACTGATGTATCTCCTGCCTGGGCGTACTCCACCGAGAAAACAAAGATACTGATTACTGGAGTTTTTCACAATGACTTTCTGCACCTTGCAAAGTCCAGTCTATTTTGTATCTGTGGGGATGTTAGTGTTCCCGTGGAAATTGTTCAAGCTGGTGTCTGTCGATGCTGGGTATCATCGCATTCCCCTGGTTTTGTGAATCTCTATATGAGTTTTGGTGACCACAAGCCCATCAGCCAAGTTGTTAATTTTGAGTATCGCACTCCTGTTTTGCATGAACCTGAAGCTCCTATGGAAGAGAAGTACAGCTGGGGCGAGTTTCAAATTCAGATGAGGCTTGCTTATTTGCTCTTTGCTACACAAAAGAGCCTTGACATTACCACTAGCAAATTGTTACCTAATGCACTGAAGGAGGCCAAGAAATTTGTCTTCAAAACCTCGTATATTTCCAAAAGTTGGCAATACTTGATTAAGTCAATTGAAGAGAACAAAACTCCATTTCCAGAAGCAAAAGATGCCTTGTTCGAAATCGCATTAAAAAATAGACTAAAAGAATGGCTGTTGGAAAGAATTATCTTAGGTTGTCAGACTACTGAATATGATGCCTTAGGTCAAGGTGTAATCCATTTGTGCTCGATTTTGGGTTATACATGGGCTGTTTCCTTATTTTCATGGTCAGGTTTTTCATTGAATTTCCGTGATAAATTTGGATGGACAGCTCTGCATTGGGCAGCTTATTATGGAAGGGAGAAAATGGTTGCAGCTCTTTTGTCTGTGGGGGCAAGGCCAAATTTGGTGACAGATCCTACTCCTCAAAATCCTGGTGGATGTACTGCTGCTGATCTTGCTTATATGAATGGTTATGATGGCTTAGCAGCTTACCTTTCAGAAAAGTCTCTGGTTGGGCAGTTCAATGATATGAGTGTGGCAGGAAATATCAGTGGCTCACTGGAAACTGCTAGCTCAAGTGATCCAGTAAATTCTGAGAAGCTCAATGAGGATCAGCTGTATATGAAGGATACATTAGCAGCTTACCGGACAGCTGCTGAGGCAGCAGCACGCATACAAGCTGCATTTAGGGAGCATTCGCTAAAATTACGAACTAAGGCTGTTGAACTTTTCAGTCCAGAGGCTGAAGCACGCCAAATAGTTGCAGCAATGAAAATTCAACATGCCTTTCGGAAGTTTGAGTCAAGGAAGCTTATGGCTGCTGCTGCTCGTATCCAGTACACCTTCCGTACTATGAAGATGCGGAAAGAATTTCTCCACATGCGTCGTCAGGCAATCAAAATTCAGGCTGCTTTCCGGGCTTTCCAAGAGAGAAAGAACTACCGTAAAATTATTTGGTCTGTTGGGGTGGTTGAAAAAGCAATCCTGCGTTGGCGTTTAAAGAGACGAGGCTTTCGTGGCCTCTGTGTCAATCCTGTTCAAGGAGTGGCAGATCAGGAGGAAACAGAGTATGATACAGAGGAGGACTTTTTCCGGACTGGCAGGAAACAAGCTGAAGAACGTGTTGAGAGATCTGTAGTACGTGTGCAAGCTATGTTCCGTTCTAAGAAAGCACAAGGAGATTATAGGAGGATGAAGCTGGCCCATAATCAAGCAAAGCTGGAACTAGAATATGAAGAGCTCCTCAATTCTGAGGTTGATATGGGAGTGAAAACATAG 2781 0.4164 MMANNLTGELLGSEIHGFHSLQGLDVGNIMEEARSRWLRPNEIYAILCNYKYFTIHVKPLNLPKSGTIVLFDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNEERIHVYYAHGQDNPSFVRRCYWLLDKSLDHIVLVHYRETQELQGSPVTPVYSNSSHASEPTTPCILSEELDSEINKAYAGELNDNLSVKSHELRLHEINTLEWDDLVVTNDLNTSTTSTPTGGNIPCFHQEKQILLNGTSSKVANNPSAEIQSFDILSNPIDGSNSAPYNFPESSNLQSSYSQVNSNVQMGQPNTVGGASYVDIIINDNLQSQDSFGKWINDIISDSPCSVDDSGLESSVSSVQDSHSPLVDHHQSSLPEQVFNITDVSPAWAYSTEKTKILITGVFHNDFLHLAKSSLFCICGDVSVPVEIVQAGVCRCWVSSHSPGFVNLYMSFGDHKPISQVVNFEYRTPVLHEPEAPMEEKYSWGEFQIQMRLAYLLFATQKSLDITTSKLLPNALKEAKKFVFKTSYISKSWQYLIKSIEENKTPFPEAKDALFEIALKNRLKEWLLERIILGCQTTEYDALGQGVIHLCSILGYTWAVSLFSWSGFSLNFRDKFGWTALHWAAYYGREKMVAALLSVGARPNLVTDPTPQNPGGCTAADLAYMNGYDGLAAYLSEKSLVGQFNDMSVAGNISGSLETASSSDPVNSEKLNEDQLYMKDTLAAYRTAAEAAARIQAAFREHSLKLRTKAVELFSPEAEARQIVAAMKIQHAFRKFESRKLMAAAARIQYTFRTMKMRKEFLHMRRQAIKIQAAFRAFQERKNYRKIIWSVGVVEKAILRWRLKRRGFRGLCVNPVQGVADQEETEYDTEEDFFRTGRKQAEERVERSVVRVQAMFRSKKAQGDYRRMKLAHNQAKLELEYEELLNSEVDMGVKT 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0409 926 ProSiteProfiles IQ motif profile. 877 905 IPR000048 GO:0005515
Bisa01g0409 926 SUPERFAMILY Ankyrin repeat 548 669 IPR036770 -
Bisa01g0409 926 ProSiteProfiles IQ motif profile. 795 819 IPR000048 GO:0005515
Bisa01g0409 926 Gene3D - 533 674 IPR036770 -
Bisa01g0409 926 Gene3D Immunoglobulins 366 461 IPR013783 -
Bisa01g0409 926 ProSiteProfiles IQ motif profile. 772 801 IPR000048 GO:0005515
Bisa01g0409 926 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 25 905 - -
Bisa01g0409 926 Pfam IQ calmodulin-binding motif 797 816 IPR000048 GO:0005515
Bisa01g0409 926 Gene3D - 771 819 - -
Bisa01g0409 926 SMART iq_5 718 740 IPR000048 GO:0005515
Bisa01g0409 926 SMART iq_5 794 816 IPR000048 GO:0005515
Bisa01g0409 926 SMART iq_5 875 897 IPR000048 GO:0005515
Bisa01g0409 926 SMART iq_5 771 793 IPR000048 GO:0005515
Bisa01g0409 926 ProSiteProfiles Ankyrin repeat region circular profile. 607 635 - -
Bisa01g0409 926 ProSiteProfiles CG-1 DNA-binding domain profile. 26 152 IPR005559 GO:0003677
Bisa01g0409 926 SMART CG_1_2 29 147 IPR005559 GO:0003677
Bisa01g0409 926 SMART ANK_2a 607 636 IPR002110 GO:0005515
Bisa01g0409 926 SMART ANK_2a 646 677 IPR002110 GO:0005515
Bisa01g0409 926 Pfam Ankyrin repeats (3 copies) 574 636 IPR002110 GO:0005515
Bisa01g0409 926 FunFam calmodulin-binding transcription activator 5 537 677 - -
Bisa01g0409 926 SUPERFAMILY E set domains 371 458 IPR014756 -
Bisa01g0409 926 ProSiteProfiles Ankyrin repeat profile. 607 639 IPR002110 GO:0005515
Bisa01g0409 926 Pfam CG-1 domain 32 145 IPR005559 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0409 Bisa-ChrBisa01 5675602 5687214 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0409 29 909 CAMTA Transcription Factor Family AT3G16940 55.593 0.0 947
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Bisa01g0409 CG-1 7.2e-46 No_clan