Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0384 ATGCAATTCCTACTAAGCATGGTGCTCATCAGCACTGTATGCCTAGTTCAAACGAAATCCATCATCGAGCCCTGCAATTCCTCAGACTCCTGCCCTTCCCTTCTCTCCTACGTCCTCCCATGGGACTCCAAGCTCTCTGAAATTGCGTCGCGCTTCCAAGTCAACGTCTCCGACATCCTGGCCGCCAACTCCGTCTTCCCGATCACACCGGCACTCGCCAATCAGATCCCTCCCCTCCAAATCCACCGTCAAAATCCCCATCCCCTGCCCCTGCATCGACGGAATCCGAAGATCCACGTCCGTGATCCACACCATTCAGCCGTGGGACACGCCGGAATCCATAGCGGAGGGCTACGGGGGGCTGGCGAACTGGGCGCAAATCGAGGCCGTGAACAGCATCGACCAAACGAAGCGATTAACGAGCGGAAGGAGGCTGGTGATTCCGTTACCGTGCACGTGCTTGAACAATGTGCGGAATGGCGAAACGACGGTGTACATGTCGTATGTGGTGAGGAAGGGAGAGAGCATGAGGAGTATAGCAATGGGATGGGGAAGTACGGTTTCAGAGTTGGAGATAGTGAACGGAGTGGCTCAAGATGTGGTGGAAGCGGGAGACATACTCGCTCTTCCTATTCCAGCATTTCATCTTCAACCTCCCAAAGAAAAAAGGAAAACATTACTAGGCTAGCTAGGGCTTTTTCAAAAATGAAAGATGCAAACGCAGTAGTGGGAGGGAAAACAGCTCGAGCCTGTGACAGCTGCATTCGGAGAAGGGCACGATGGTTCTGTGCAGCCGATGATGCTTTCCTCTGCCACCACTGCGACAACCTCGTTCACTCTGCAAATCCACTAGCCACCCGACATGATAGAATTCGTCTTCAAGCCTCGTCCTCTAACCCAATCTCCTCCTCCTGGTTCGCTGGATTCACTCGCAAGCCAAGAACTCCACGTCATCATGGTACTAAGAATGCTTCAGTACTGTTCTTGAATACTCTCCCTCTTGTGCCTGACCTGGGATATGAGGAACATCCACCACTGCTGGATCACACTACTGAGGATCATCAGCTTTTTGGTCGCGTGCCCGTGTTTGACCCTTTTGACCACATAGTATTGGACCCGACGGTGAGTCAGGATGACGAAGTTGCTGGATCCGCCGACTTGGACCATTTTTCGGAGTTTCTTCCATCGGATGTGGATCTTGCTGAGTTTACTGCTGATGTGGAGAGCTTACTTGGAAACGGGGCTGATGAGGAATCCCCTGAAATGAAAGGTTCAGAGCTGTTTGATTGTCAACAAAAACAAGAAGAAGAAGAAGAACGTAGAAGTGGAATGGTAGTGAAGGTTAAGGATGAAACAGTTGATACCGCAGTGGACATTAGTGCAGGCGATGTGCTAATAAATTGGAAGGGTGAATCTCATGAGGACCAGAATGATATGGATAGTGTGGGAAGTGAGAGCAAGATATTCCTGAGGCTGAACTATGAGAACGTCATTTCTGCTTGGGACAACCAAGGTTGTCCATGGACAACAGGACATACACCACACTTCAACTCTCATCAGTATCACTGCTTGGGTTGGAGTGGAGGGAATATTGTTGAATGCTCAAAGGGGGAAGCAGGAAGCTTGAGGGGACACGTGGTGGATGGGGAAAGAGAAGCAAGAGTATCGAGGTACAGAGAGAAGAGAAGAACGCGTTTGTATGCGAAGAAAATAAGGTACCAAGTGAGGAAGTTGAACGCAGAAAAGAGGCCCAGAATGAAAGGTCGATTTGTGAAGAGGACTTGA 1785 0.502 MQFLLSMVLISTVCLVQTKSIIEPCNSSDSCPSLLSYVLPWDSKLSEIASRFQVNVSDILAANSVFPITPALANQIPPLQIHRQNPHPLPLHRRNPKIHVRDPHHSAVGHAGIHSGGLRGAGELGANRGREQHRPNEAINERKEAGDSVTVHVLEQCAEWRNDGVHVVCGEEGREHEEYSNGMGKYGFRVGDSERSGSRCGGSGRHTRSSYSSISSSTSQRKKENITRLARAFSKMKDANAVVGGKTARACDSCIRRRARWFCAADDAFLCHHCDNLVHSANPLATRHDRIRLQASSSNPISSSWFAGFTRKPRTPRHHGTKNASVLFLNTLPLVPDLGYEEHPPLLDHTTEDHQLFGRVPVFDPFDHIVLDPTVSQDDEVAGSADLDHFSEFLPSDVDLAEFTADVESLLGNGADEESPEMKGSELFDCQQKQEEEEERRSGMVVKVKDETVDTAVDISAGDVLINWKGESHEDQNDMDSVGSESKIFLRLNYENVISAWDNQGCPWTTGHTPHFNSHQYHCLGWSGGNIVECSKGEAGSLRGHVVDGEREARVSRYREKRRTRLYAKKIRYQVRKLNAEKRPRMKGRFVKRT 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0384 594 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 239 594 - -
Bisa01g0384 594 CDD Bbox1_BBX-like 250 293 - -
Bisa01g0384 594 MobiDBLite consensus disorder prediction 194 225 - -
Bisa01g0384 594 ProSiteProfiles Zinc finger B-box type profile. 246 293 IPR000315 GO:0008270
Bisa01g0384 594 SMART bboxneu5 246 293 IPR000315 GO:0008270
Bisa01g0384 594 ProSiteProfiles CCT domain profile. 551 593 IPR010402 GO:0005515
Bisa01g0384 594 Pfam CCT motif 551 593 IPR010402 GO:0005515
Bisa01g0384 594 Pfam B-box zinc finger 248 291 IPR000315 GO:0008270
Bisa01g0384 594 MobiDBLite consensus disorder prediction 200 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0384 Bisa-ChrBisa01 5259939 5269073 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0384 236 593 C2C2-CO-like Transcription Factor Family AT1G25440 43.373 6.92e-84 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Bisa01g0384 zf-B_box 2.7e-05 No_clan