Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0381 ATGGCTGATGTCCTGAATCCCAACCCAGTCTCACCTCCTCGTCCTCCTTCTCCGAACTCAGAGCAGAAATCCAACATGCCCATGTTCTGCTATGGCCTTGCCGTCGTAGGAACAGCGGCCGTAGCCCTAGTACTCTACAACCTTATCGTCATCAAAAGATGTGGGCGCCGCCATATCCTATCCCCATCAGAGTCGTCGTCGTCGTCACAGGCAAATCAAATCAGAGTGGTTGAAGCAGTGAGAGCACCCTACAGGAGTAGTTTTGATCAGGCTGGTTTAACAAATTTCAGAAACATGGCATGGAGGTTCAAGTACAAGGGAGGAGAAGGAGAAGGAGGAAGAAGAGGAAGGGAGTGTGATTGTGAGTGCGCGGTGTGCTTGTCGGGGTTCGAGGAAGGAGAGGAGGTGAGGAAGCTTCCGAGGTGTAACCACTGCTTTCATGCAGAGTGCATAGACATGTGGCTCTGTTCTCACTTCGACTGCCCGATATGTCGGACGCCTGTGCTGCTTTTTTCTCGGCCGTCTCCGGAGGAGATTGCCGCCATTAATGGCGTCGGTGTTTGA 564 0.5248 MADVLNPNPVSPPRPPSPNSEQKSNMPMFCYGLAVVGTAAVALVLYNLIVIKRCGRRHILSPSESSSSSQANQIRVVEAVRAPYRSSFDQAGLTNFRNMAWRFKYKGGEGEGGRRGRECDCECAVCLSGFEEGEEVRKLPRCNHCFHAECIDMWLCSHFDCPICRTPVLLFSRPSPEEIAAINGVGV 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0381 187 CDD RING-H2_EL5-like 122 165 - -
Bisa01g0381 187 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 19 168 IPR044675 -
Bisa01g0381 187 SMART ring_2 123 164 IPR001841 -
Bisa01g0381 187 MobiDBLite consensus disorder prediction 1 22 - -
Bisa01g0381 187 ProSiteProfiles Zinc finger RING-type profile. 123 165 IPR001841 -
Bisa01g0381 187 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 102 170 IPR013083 -
Bisa01g0381 187 SUPERFAMILY RING/U-box 118 171 - -
Bisa01g0381 187 Pfam RING-like zinc finger 122 151 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0381 Bisa-ChrBisa01 5227227 5227790 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0381 33 175 C3H Transcription Factor Family AT5G17600 36.486 5.90e-21 86.7