Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0378 ATGGAAGAAGGAAAAGGTGTGAGGGACAAGAAAGTGGACAAAAATGAAGTCATTTTGCAACTTTTGGATAATGAAGAAGGCTCATTTGCCAAGAAAGAAAGCACAGATTCTAAAGGTTCTCCAGTAGCCGAAAGTAGTTCTTTTTCTCTTTATCGCAATACTCAAATGGGTTCTTTGCTAAAATCAAAACAGTCCGACAATCTTAGAAGCTCAGAGTCATTGTTGGAGTTAAGTACACGATGGTCGTTGGGGAGGTCAGAGTTCTCTAAACCAAAATCAAGACTGGTAGAGCCACCCTACCCAAAAGATGCGAACTTTTTGGAAGAAAAAAGGACCCAAATAACGAGTTCCAACGATAATGCATCTAATAGCAACTCTCCGAACATGGCTTTGCCAAACCAGAAAGTCAATGCAACCCCTATCACTCCACGAACGCCACGAACGCTTGTGTTTGGAGAAGATGAAGATGAAGATGAAGATGAAGAAGATAATGAAGAAGTGTACAAGATCGCGAATCTTAAAGTGAGCCAGAGATCAGGAAAAAAATGGAGATTGATATTCATGTTAGAGTGGATTACTTTTGTTTGCATTCTAGGCTTTATGATAGTGAGCTTCACAGTCCATAAGCTTCAAAATAGGTTTTTATGGGGTTTAGAACTATGGAAGTGGTGTGTTCTTGCACTAGTAATCCTCTGTGGTAGATTGGTCACAGAGTGGTTTATGAATGTTTTGGTTTTCTTCATTGAAAAAATCTTCTTGTTCAAGAAGAAAGTTCTATATTTTGTTCATGGTGTTAAGAAGAGTGTACAGGCCTTTATTGGGTTATCTTTAGTCCTTCTAACATGGGAGTTACTCTTCCACCATGGAGAAGAGAGATCCAGAAAAACCACCAAGATTCTTAATTATATTACTAGAACACTTAGTTCTTCCCTTATTGGGGTAACTATATGGCTTGCAAAAACTTTGTTGATAAAGCTATTGGCTGCTTCCTTCCAATCCTCCAGATTCTTTGACATAATTCAGGAATCAATCTTTCATCAGTACATTCTTCGAACTCTTTCAGGGCCTCCCACGATGGAGATGACTGAAATGGTAGGGAAAACTGGAAGCAGTGGCAGATTGAGTTTGAGGACCTTAAATAAAGAGAATAAATGGAATAAAGAAGAAATCATTGATGTAGACAAATTGAAGAAAATAAAACAAGAGAAAGTTTCAGCTTGGACCATGAAAGGGTTGATTAATGTGATAAGATGTTCTGGATTGTCTACCACCTCATACGAGAACGATGGTGAAGAAGGGAGTGAGAAGAAAGATAAGGAAATTAATAGTGAATGGGAAGCAAGATCAACTGCATATCAAATTTTCAGGAACGTAGCCAAGCCAGGAAACAAGTACATTGAGGAGGAAGATTTGTTGAGATTCATGAGAAAAGAAGAGGTGGAAAATGTGGTTCCACTATTTGAAGGAGCAGTTGAAACTAGAAAAATCAAGAGGAAGTCTTTGAAGAATTGGCTGGTGAAAGTCTACCTTGAACGTCAATCACTAGTACATTCCTTAAATGACGCCAAAACAGCAGTAGAAAAGTTAAACAAGCTTGCTTCAGTGATTGTCTTTGTTGTGATCATTATAGTGTGGTTACTCATAATGGGGTTCTTGACAACCAAAATACTTGTTTTCATCTCATGTCAACTCTTTCTGATGGTGTTCATGTTTGGCAACACAGTCAAGATTGTGTTTGAAGCTATCATATTTGTTTTCGTGGTGCACCCTTTTGATGTTGGTGATCGATGTGTCATCGATGGTGTTCAGATGGTAGTAGAAGAGATGAACATACTTACTACTGTCTTCTTGAGATATGACAATGAAAAGATATTCTATCCGAATTCAGTTTTGGCTAGTAAACCAATCAGCAACTTTCACAGGAGTCCTGAAATGAATGATTCAGTTGAATTTTCTGTGGATTTTTCTACTTCAGTTGAGAGCATTGGAGCCTTGAAAGCTATAATCAAAGAATACTTGGAGAGTAAGCCTCAACACTGGAGGGCTAACCACAGTGTGACAGTTAAGGGCATTGAGGATGTAAACAAGATGAAAATGGCTCTCAATGTTACTCACACAATTAATTTTCAAAACTATGGGGACAAAAGCAATAGAAAATCTGAACTTGTCTTGGAGTTAAAGAAAATATTTGAAGATCTTGATATCAAATATAATCTCCCACCACAACAAGTTCATCTCAGCTATGTGGGGCCAGCCACCACGTCAGCTCAGCCGATTTAG 2280 0.3825 MEEGKGVRDKKVDKNEVILQLLDNEEGSFAKKESTDSKGSPVAESSSFSLYRNTQMGSLLKSKQSDNLRSSESLLELSTRWSLGRSEFSKPKSRLVEPPYPKDANFLEEKRTQITSSNDNASNSNSPNMALPNQKVNATPITPRTPRTLVFGEDEDEDEDEEDNEEVYKIANLKVSQRSGKKWRLIFMLEWITFVCILGFMIVSFTVHKLQNRFLWGLELWKWCVLALVILCGRLVTEWFMNVLVFFIEKIFLFKKKVLYFVHGVKKSVQAFIGLSLVLLTWELLFHHGEERSRKTTKILNYITRTLSSSLIGVTIWLAKTLLIKLLAASFQSSRFFDIIQESIFHQYILRTLSGPPTMEMTEMVGKTGSSGRLSLRTLNKENKWNKEEIIDVDKLKKIKQEKVSAWTMKGLINVIRCSGLSTTSYENDGEEGSEKKDKEINSEWEARSTAYQIFRNVAKPGNKYIEEEDLLRFMRKEEVENVVPLFEGAVETRKIKRKSLKNWLVKVYLERQSLVHSLNDAKTAVEKLNKLASVIVFVVIIIVWLLIMGFLTTKILVFISCQLFLMVFMFGNTVKIVFEAIIFVFVVHPFDVGDRCVIDGVQMVVEEMNILTTVFLRYDNEKIFYPNSVLASKPISNFHRSPEMNDSVEFSVDFSTSVESIGALKAIIKEYLESKPQHWRANHSVTVKGIEDVNKMKMALNVTHTINFQNYGDKSNRKSELVLELKKIFEDLDIKYNLPPQQVHLSYVGPATTSAQPI 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0378 759 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 15 754 IPR016688 -
Bisa01g0378 759 MobiDBLite consensus disorder prediction 88 138 - -
Bisa01g0378 759 MobiDBLite consensus disorder prediction 110 138 - -
Bisa01g0378 759 FunFam Predicted mechanosensitive ion channel 590 639 - -
Bisa01g0378 759 PIRSF Memb_At2g17000 10 758 IPR016688 -
Bisa01g0378 759 Pfam Mechanosensitive ion channel 530 736 IPR006685 GO:0016020|GO:0055085
Bisa01g0378 759 Coils Coil 759 759 - -
Bisa01g0378 759 SUPERFAMILY Sm-like ribonucleoproteins 580 639 IPR010920 -
Bisa01g0378 759 Gene3D - 590 639 IPR023408 -
Bisa01g0378 759 MobiDBLite consensus disorder prediction 23 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0378 Bisa-ChrBisa01 5197097 5200358 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0378 25 747 Mechanosensitive Ion Channel Family AT5G12080 49.863 0.0 687