Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0372 ATGAAATTAGTGGTTGAGAGTGAAGCACCATCTGATGGACTAAGCTCCCCTCTTTGGTGTATGACGTCTATGAAGATCTGTGAAGCCCACAACTCTTGGATGGCTGTGGGCAGGATTGCCGACAAAAGCAGCCCAATCAGTAATCCATCCCAGCACAGCCTAATAGATATAAACATATCTTTCCGCTCAAAGCCCCTCTCCGGAATTAGGGTTTGCAGAGACACGAGACAAGCACTGCCACTTTTGGTGTTGAGATCTTTCGCCCCTGCATCTACCCCCGCTGCGACAATGGCAACTCAGATGAGCAAGAAGAGAAAGTTCGTTGCCGATGGAGTTTTCTTCGCCGAGCTGAACGAGGTCTTGACCCGAGAGCTTGCTGAGGATGGATACTCTGGTGTTGAGGTTAGAGTAACTCCGATGCGCACTGAGATCATTATCAGAGCCACTCGAACCCAGAACGTACTTGGCGAGAAAGGAAGGAGAATTAGGGAGTTAACCTCAGTCGTACAGAAGAGATTTAAGTTTCCAGAGAATAGCGTGGAGCTATACGCTGAGAAGGTCAACAACAGGGGTCTATGTGCTATTGCTCAGGCCGAGTCTCTTCGCTATAAGCTTCTTGGCGGTCTCGCTGTACGGAGGGCTTGCTATGGTGTTTTAAGATTCGTCATGGAAAGTGGTGCAAAGGGATGTGAGGTCATTGTAAGTGGAAAATTGAGGGCTCAGCGTGCCAAATCCATGAAGTTCAAGGATGGGTATATGATTTCTTCGGGTCAGCCAGTCAAAGATTATATTGATTCTGCCGTAAGACATGTACTTCTCAGACAGGGGGTTCTTGGTATCAAGGTCAGGATCATGCTTGACTGGGACCCTAAAGGGAAGCAGGGTCCTAAAACTCCCCTTCCTGATATTGTTACAATCCACCCTCCAAAGGAGGAAGAAGAATACATTCGTCCTGCTGCTATTGTGGCAACTGATATTGAGGTCCCAGTGGCTGTGGCTTGA 1002 0.482 MKLVVESEAPSDGLSSPLWCMTSMKICEAHNSWMAVGRIADKSSPISNPSQHSLIDINISFRSKPLSGIRVCRDTRQALPLLVLRSFAPASTPAATMATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQGVLGIKVRIMLDWDPKGKQGPKTPLPDIVTIHPPKEEEEYIRPAAIVATDIEVPVAVA 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0372 333 CDD KH-II_40S_S3 101 191 - -
Bisa01g0372 333 NCBIfam 30S ribosomal protein S3 104 306 IPR005703 GO:0003735|GO:0006412|GO:0015935
Bisa01g0372 333 ProSitePatterns Ribosomal protein S3 signature. 243 279 IPR018280 -
Bisa01g0372 333 Gene3D - 189 315 IPR036419 -
Bisa01g0372 333 SUPERFAMILY Prokaryotic type KH domain (KH-domain type II) 106 195 IPR009019 GO:0003723
Bisa01g0372 333 Pfam KH domain 116 189 IPR004044 GO:0003723
Bisa01g0372 333 Pfam Ribosomal protein S3, C-terminal domain 202 284 IPR001351 GO:0003735|GO:0006412
Bisa01g0372 333 FunFam 40S ribosomal protein S3 97 188 - -
Bisa01g0372 333 ProSiteProfiles Type-2 KH domain profile. 117 188 IPR004044 GO:0003723
Bisa01g0372 333 PANTHER 30S/40S RIBOSOMAL PROTEIN S3 102 294 - -
Bisa01g0372 333 FunFam 40S ribosomal protein S3 189 324 - -
Bisa01g0372 333 Gene3D - 94 187 IPR015946 -
Bisa01g0372 333 SUPERFAMILY Ribosomal protein S3 C-terminal domain 189 287 IPR036419 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0372 Bisa-ChrBisa01 5095774 5099611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0372 97 331 Cytoplasmic Ribosomal Protein Gene Family AT5G35530 87.660 5.69e-153 427