Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0347 ATGACGCTCCTCTTGAACTCTGACTCGGCCCATAAAACACAGATTTGTGGGTTGGATTACAGAACAGAGGTGTCACAACGCCTTCTTGACGCTTCTCACAACGACGACACCAACTCTGCGTTTGAAATCATCGCCAATCCTAGCGTCGACGTGAACTTCATCGGAACGGCGAACCTGAAGTTAAGAACGACGGAGATTGTGTTGCACGACGAGTCGCCTCACGAAGTCCGTTTCGGGCACGAGGAGTTCAAGACCGAGGTCACTCCTCTGTTTCTGGCCGCTCATAATGGAAATTTGACACTCCTCAGGAAATTACTGAATGTCGGGACTAATGTAAATCTGAGATTGTTCCGGGGATATGCGACGACAGCAGCAGTGAGAGAAGGTCACGAAGAAGTATTGGAAGTTCTTATTAATTTTGGAGCGTCTCAGCGTGCATGCGAGGAGGCTTTACTGGAAGCAAGCTATTTCGGACACGCCAGAGCTTCTGAGCTACTTATGGAGTCCAACATGATCAGTCCTCAAGTTGCTGTTCATGCCCTTGTCTCTGCTTGTTGCAGAGGTTTCGTTGAGGTTGTCCATGTACTCATCAAGCATGGAGTGGATGTCGATGCAGTTAGTAGGACGCTGCTTCACTCGTCAAAGCCATTTCTCCACGCCAATGTTGATTGCAATGCATTGTTTGCTGCTGTCGTTAGTAGGCAGAGTAACGTTGTTAGATTGCTCTTGGAGGTTGGCGTAAGGACAGACATCAAGGTCAAAGTAGGGGCATGGTCCTGGGAAAATGAGACGGGGGAAGAAATTCGTGTGGGTGCAGCACTAGCTGAGGCCTATCCTATAACCTGGTGTGCTGTGGAGTACTATGAATCTACTGGTTCTATATTGCACGCGCTTGTCTCCCATCTCTCCCCTAATAGTTACCACATTGGGAGGACCCTCTTGCACCATGCCATCCTTTGTAACAACGAGAAAGCCTTAAAAATACTCCTAAATTTCAGTGCAGATTCTGAAGCAACAATTCAAACAAATGAAGAAACCAATTGTCTCCCAATTCACATGGCTGCAAGGCTTGGATTATGTAACATTCTTAGCTGTTTGATTAATGTTGGTTGTAACTTGAACTCTGTGACAAACTCTGGAGATTCGGCGCTAATGATATGTGCGAGGTATAAGCACGAGAAGTGCCTTACAGTTTTAGCATCAGCAGGTGCTGATTTGGGTTTGGTAAACGCAAATGGTAAATGCTTAACCTCAATGGCAAACTCTGTTCAGTGGAGTAATGTGTTTGAGAAAGCTATTTTGGATGTGATTCGAGGTGGGAATGTTGTTAAATCAAGCAATGCCACGAGATTTTCTGCTCTGGTTTTGGCAACTCGTGCAAATGATATGGAGGCATTGAAGAAGCTCATTGAACATAAGAACATCGATATAGATGAGCAAGATGGTAATGGATACTCAGCTGCTATGATAGCAGCAGAAGAGGGTAACGCAGAGGCTTTCAGGTTGCTTCTTTATGCTGGGGCTGATGTACTCCAGCTGAAAAACAAGCATGGTTTGACAGCACTTGATCTTGTTGACGTGAACCAAAATGGTAAAGTGTTTGAAAAGGTTATGAATGAATATGCATATGAAAAGAAATGCAGTTGTTCCACTGACAAAAATCCTCTTCACTGCGCAACTCGCCATAGGGACATAGGTTTTGTTCAGAAATTAATAGAAAAAGGGTGGGACGTCAATGCTTTTGACGACACTGGATCTACCCCATTAATGTTGGCAGCAAGAAGATGCCATGGTAAAATGTGTGAGCTTCTGATCTCATGTGGAGCCAAATGTGATATCCAGAACGAGAGACACGAGACAGCACTTTCACTTGCCAGAGTAAATGGTCAAGAAAATGATGCAGAGAGAGTTATACTGGATGAGCTAGCTCGAAGAACAGTCTTGCGTGGGGCTCATGTGAGGAAGCATACTAAGTGTGGTAAAGGGTCATTTCATAGGAAGCTACTTATGATGGTTGGGGATGCTGGAATTTTAAGATGGGGAAAATCGAATAAGAGGAATGTGATTTGTAGAGACGCTAAGGTTGGAGGCAGTGTGAAGTTTCGATGGAACCGTAGGAGGAAGTGTGATGTTGAGGAGGCGGGATTGTTTTATGTGGTCACTACGAAGAACAAGGAGGTGCATTTTGTATGTGAAGGTGGGGTTCAAATGGCTGAGTTGTGGGTGAGAGGGATCAAATTGATGACAACAGAAGCCATTTTTGGCAGAAGAGTTCATTATGTGTAA 2286 0.4484 MTLLLNSDSAHKTQICGLDYRTEVSQRLLDASHNDDTNSAFEIIANPSVDVNFIGTANLKLRTTEIVLHDESPHEVRFGHEEFKTEVTPLFLAAHNGNLTLLRKLLNVGTNVNLRLFRGYATTAAVREGHEEVLEVLINFGASQRACEEALLEASYFGHARASELLMESNMISPQVAVHALVSACCRGFVEVVHVLIKHGVDVDAVSRTLLHSSKPFLHANVDCNALFAAVVSRQSNVVRLLLEVGVRTDIKVKVGAWSWENETGEEIRVGAALAEAYPITWCAVEYYESTGSILHALVSHLSPNSYHIGRTLLHHAILCNNEKALKILLNFSADSEATIQTNEETNCLPIHMAARLGLCNILSCLINVGCNLNSVTNSGDSALMICARYKHEKCLTVLASAGADLGLVNANGKCLTSMANSVQWSNVFEKAILDVIRGGNVVKSSNATRFSALVLATRANDMEALKKLIEHKNIDIDEQDGNGYSAAMIAAEEGNAEAFRLLLYAGADVLQLKNKHGLTALDLVDVNQNGKVFEKVMNEYAYEKKCSCSTDKNPLHCATRHRDIGFVQKLIEKGWDVNAFDDTGSTPLMLAARRCHGKMCELLISCGAKCDIQNERHETALSLARVNGQENDAERVILDELARRTVLRGAHVRKHTKCGKGSFHRKLLMMVGDAGILRWGKSNKRNVICRDAKVGGSVKFRWNRRRKCDVEEAGLFYVVTTKNKEVHFVCEGGVQMAELWVRGIKLMTTEAIFGRRVHYV 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0347 761 Pfam Ankyrin repeats (3 copies) 449 510 IPR002110 GO:0005515
Bisa01g0347 761 Pfam Ankyrin repeats (3 copies) 346 408 IPR002110 GO:0005515
Bisa01g0347 761 Pfam Ankyrin repeats (3 copies) 539 615 IPR002110 GO:0005515
Bisa01g0347 761 SUPERFAMILY Ankyrin repeat 309 638 IPR036770 -
Bisa01g0347 761 ProSiteProfiles Ankyrin repeat region circular profile. 551 583 - -
Bisa01g0347 761 ProSiteProfiles Ankyrin repeat region circular profile. 483 510 - -
Bisa01g0347 761 ProSiteProfiles Ankyrin repeat profile. 483 515 IPR002110 GO:0005515
Bisa01g0347 761 Gene3D - 537 645 IPR036770 -
Bisa01g0347 761 Gene3D - 434 536 IPR036770 -
Bisa01g0347 761 Gene3D - 11 176 IPR036770 -
Bisa01g0347 761 SMART ANK_2a 85 114 IPR002110 GO:0005515
Bisa01g0347 761 SMART ANK_2a 346 375 IPR002110 GO:0005515
Bisa01g0347 761 SMART ANK_2a 176 205 IPR002110 GO:0005515
Bisa01g0347 761 SMART ANK_2a 379 408 IPR002110 GO:0005515
Bisa01g0347 761 SMART ANK_2a 222 253 IPR002110 GO:0005515
Bisa01g0347 761 SMART ANK_2a 584 613 IPR002110 GO:0005515
Bisa01g0347 761 SMART ANK_2a 117 146 IPR002110 GO:0005515
Bisa01g0347 761 SMART ANK_2a 309 338 IPR002110 GO:0005515
Bisa01g0347 761 SMART ANK_2a 449 479 IPR002110 GO:0005515
Bisa01g0347 761 SMART ANK_2a 483 512 IPR002110 GO:0005515
Bisa01g0347 761 SMART ANK_2a 551 580 IPR002110 GO:0005515
Bisa01g0347 761 Gene3D - 294 433 IPR036770 -
Bisa01g0347 761 ProSiteProfiles Ankyrin repeat profile. 551 583 IPR002110 GO:0005515
Bisa01g0347 761 ProSiteProfiles Ankyrin repeat profile. 584 616 IPR002110 GO:0005515
Bisa01g0347 761 PANTHER ANKYRIN REPEAT-CONTAINING 23 742 - -
Bisa01g0347 761 ProSiteProfiles Ankyrin repeat region circular profile. 85 115 - -
Bisa01g0347 761 ProSiteProfiles Ankyrin repeat profile. 85 117 IPR002110 GO:0005515
Bisa01g0347 761 ProSiteProfiles Ankyrin repeat region circular profile. 584 616 - -
Bisa01g0347 761 SUPERFAMILY Ankyrin repeat 83 256 IPR036770 -
Bisa01g0347 761 Gene3D - 177 257 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0347 Bisa-ChrBisa01 4676354 4682186 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0347 334 546 Ion Channels AT2G25600 28.571 3.06e-09 58.5