Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0342 ATGGCGGCTGGGAGACATGGGGGTTATCGCGACCACGAGTTTAGGGATCGGGAGTCCAATTTCGATGTCTCAAGGCGGGGTTTAACTAATTCTAAAGAAGATTACGATCGTATTAGGACTGGTAGCCGTGATGTTGTGAGGGGTCGGAACACGGATGCCAGAGATAGGATTAGGGTGAGACAGAAGGATATTAGGGAGAGAGAAGCGGTAAATGGCAGCTACCGCTCCTCTTCGAGTAGGAGTGACTCAGGGAGCAGTGGTGGTGGCCTCGGTCCCAGAAGATGTGGTTTTTCTGTTAAGGCAATTGATAGGGAGCCAGGTGAGCTTTCCAGTGACAGTGGATCTGATGATGCTATTGAATCAGAACAAGTGAAAGATTTTGAGGTTGCGAAGGTTGAAAAAAATGGGACTCAATCTCCATTGGAGAGGAAAAGAAAATTCTCCCCGATAGTGTGGGATCAGGATGATAAAGAAGTAAATAATACATCTAAAATTAAGGTCGCCACAACGGTGACTACTCTTCCTCCTCCACCACCACTGCCAAGAGCATTTCGTCAGTCACCTAATGCTCCGTATGGTGGTGTTGAAATACATCCTGTAAAGAATAGAGAAACTGAGAATATTGAGTTGCCTACGGAAATTAAACCTCCTCTTCCCTCTTTGTCAGTCCAGGATGTTGATACTGAGTCTTCTGTAGGAGTGCTTCCTTTGTCACCAGATCAGAAGTTCAGTGATGATCGAGAAGCTGAGCAGCCAGAGGGTGATGATTATGTTCCAACTCATAATATATCATCTTCAAGATGGGCAGCTGGAGATAACTCTCCTGGCGATGAAGGTCAAATCATAGATGATGATGAATTTCCTAAAAGGAGGAGGAGATCGTCGCCCGAGTCAATGAACACCAAAGTGAGAAACAAGCTGTTGAGTCCGGAGGAGTCTAAAAGAGACCATGAAGGGGCTAGAGCGAAATCGTCTGACTCTGAAGAAAGAGGTAGCCAGAGTAAAATGAACGGTGGGGATGGTCATACTGGAATTGGATCTGACAAGGATGACTACATGGAAATTGATGGTCAAGGGATCAAAAGTGAAACTACTGTTAGTCACTCAGATACTGGTTCTGAGGATGAAGACTATGAACGCGAGACGCCGGAGCCTCCAGCTCCACCACAAAGAGTTGTTAATATGCTTCAGGGTTGTAGAAGTGTTGATGAGTTTGAGAGACTAAACAAGATAGATGAGGGAACATATGGGGTTGTATATAGGGCGAGAGATAAGAAGACTGGGGAAATTGTGGCATTGAAGAAGGTGAAGATGGAGAAGGAAAAAGAAGGCTTTCCTCTGACTTCTCTTAGGGAAATAAACATTCTTCTTTCTTTTCACCACCCATTTATAGTTGATGTGAAAGAAGTAGTGGTAGGGAGTAACCTGGATAGCATTTTCATGGTGATGGAATACATGGAACATGATCTTAAAGGCCTCATGGAGGCAATGAAGCAGCCATTCAGCCAGAGTGAAGTCAAATGCCTCATGCTCCAGCTTTTAGAAGGTGTGAAGTATCTTCACGACAACTGGGTGCTTCATAGGGATTTGAAGACTTCAAACCTTCTTTTGAATAATAGGGGTGAGTTAAAAATTTGTGATTTTGGCTTGGCTCGTCAATATGGGAGTCCACTGAAACCATATACACACCTGGTTGTTACACTTTGGTACAGGGCACCCGAACTTCTTCTGGGGGCTAAACAGTATTCAACAGCCATTGACATGTGGTCCCTGGGTTGTATAATGGCTGAGCTATTGTCCAAAGAATCACTATTTAATGGGAAGACTGAATTTGATCAAATTGACAAGATTTTCAGAACTCTTGGCACACCAAATGAAGCAATTTGGCCTGGGTTCTCTAAATTACCTGGAGTGAAGGTCAATTTTGTTAAGCATCAGTATAACCTACTGCGGAAAAAGTTTCCTGCCACATCATTCACTGGATCTCCAGTTCTCTCTGATTCTGGATTTGATTTGTTGAACAAGCTTCTTACGTATGACCCTGAAAAGAGGATCACGGCAGAAGATGCTCTTAATCATGAGTGGTTTCGTGAAGTTCCTCTCCCCAAGTCTAAGGAATTCATGCCTACTTTCCCTGCTCAACATGCTCAAGACAGGCGGATGCGGAGAGTATTAAAGAGTCCAGATCCTGTAGAGGAGCAGCGTCGAAAGGAGTTGCAGCAGGGTGAATTAGGGACTGGTGGTATTTTTGGCTAA 2256 0.4433 MAAGRHGGYRDHEFRDRESNFDVSRRGLTNSKEDYDRIRTGSRDVVRGRNTDARDRIRVRQKDIREREAVNGSYRSSSSRSDSGSSGGGLGPRRCGFSVKAIDREPGELSSDSGSDDAIESEQVKDFEVAKVEKNGTQSPLERKRKFSPIVWDQDDKEVNNTSKIKVATTVTTLPPPPPLPRAFRQSPNAPYGGVEIHPVKNRETENIELPTEIKPPLPSLSVQDVDTESSVGVLPLSPDQKFSDDREAEQPEGDDYVPTHNISSSRWAAGDNSPGDEGQIIDDDEFPKRRRRSSPESMNTKVRNKLLSPEESKRDHEGARAKSSDSEERGSQSKMNGGDGHTGIGSDKDDYMEIDGQGIKSETTVSHSDTGSEDEDYERETPEPPAPPQRVVNMLQGCRSVDEFERLNKIDEGTYGVVYRARDKKTGEIVALKKVKMEKEKEGFPLTSLREINILLSFHHPFIVDVKEVVVGSNLDSIFMVMEYMEHDLKGLMEAMKQPFSQSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNRGELKICDFGLARQYGSPLKPYTHLVVTLWYRAPELLLGAKQYSTAIDMWSLGCIMAELLSKESLFNGKTEFDQIDKIFRTLGTPNEAIWPGFSKLPGVKVNFVKHQYNLLRKKFPATSFTGSPVLSDSGFDLLNKLLTYDPEKRITAEDALNHEWFREVPLPKSKEFMPTFPAQHAQDRRMRRVLKSPDPVEEQRRKELQQGELGTGGIFG 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0342 751 FunFam Cyclin-dependent kinase G-2 488 727 - -
Bisa01g0342 751 MobiDBLite consensus disorder prediction 168 390 - -
Bisa01g0342 751 MobiDBLite consensus disorder prediction 307 335 - -
Bisa01g0342 751 MobiDBLite consensus disorder prediction 241 255 - -
Bisa01g0342 751 MobiDBLite consensus disorder prediction 282 299 - -
Bisa01g0342 751 Gene3D Phosphorylase Kinase; domain 1 390 487 - -
Bisa01g0342 751 SUPERFAMILY Protein kinase-like (PK-like) 397 702 IPR011009 -
Bisa01g0342 751 ProSitePatterns Serine/Threonine protein kinases active-site signature. 525 537 IPR008271 GO:0004672|GO:0006468
Bisa01g0342 751 Gene3D Transferase(Phosphotransferase) domain 1 488 730 - -
Bisa01g0342 751 MobiDBLite consensus disorder prediction 71 86 - -
Bisa01g0342 751 PANTHER CELL DIVISION PROTEIN KINASE 403 702 - -
Bisa01g0342 751 MobiDBLite consensus disorder prediction 1 124 - -
Bisa01g0342 751 MobiDBLite consensus disorder prediction 223 237 - -
Bisa01g0342 751 MobiDBLite consensus disorder prediction 727 751 - -
Bisa01g0342 751 ProSiteProfiles Protein kinase domain profile. 405 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g0342 751 FunFam cyclin-dependent kinase G-2 isoform X1 390 487 - -
Bisa01g0342 751 Pfam Protein kinase domain 405 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g0342 751 SMART serkin_6 405 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g0342 751 MobiDBLite consensus disorder prediction 1 70 - -
Bisa01g0342 751 CDD STKc_CDC2L1 399 696 IPR045267 GO:0004674|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0342 Bisa-ChrBisa01 4650461 4653623 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0342 396 744 Core Cell Cycle Gene Families AT5G10270 44.780 1.69e-93 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Bisa01g0342 Pkinase 3.3e-75 CL0016