Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0322 ATGCAGTCCACGTGCACTGCCACTCGACAATACTTCACTAGTTCAGTAATTATGGATAATAGTGGCTTCTCTTCTCGGCGCGATGCTTTTCCCGCCGGTCTCCGAGTTCTCGTTGTCGACGATGATCTAACATGGCTCAGGATCCTTGAGAAGATGCTCAAGAAGTGCTCCTATGAAGTGACCACATGTTGTCTAGCAAGAGAAGCTCTAAACCTGCTTCGTGAAAGAAAAGATGGATTTGACATTGTGATCAGCGACGTAAACATGCCCGACATGGATGGCTTTAAACTTCTCGAGCATGTTGGACTTGAGATGGATCTTCCTGTTATTATGATGTCTGTTGATGGAGAAACAAGGAGGGTGATGAAAGGCGTTCAGCATGGAGCATGTGATTATCTTCTTAAGCCCATAAGGATGAAAGAACTGCGAAATATATGGCAACATGTCTTTAGAAAAAGGATGCACGAGACAAGAGAATTTGGAAGTCTTGAGGCTTTTGAGGGCATTCGCTCAATGAGAGATGGATCAGATCAGTTTGATGATGGGAACTTGTTTTCTCTAGAAGATATGACCTCAACGAAGAAAAGAAAAGATCCAGATAACAAACACGATGACAAAGAATTTAGAGATCATTCTTCCACAAAGAAACCCAGAGTGGTTTGGTCTGTAGATCTTCATCAGAAATTTGTTAAGGCTGTGAATCAGATTGGATTTGATAAAGTTGGCCCCAAGAAAATACTTGACTTGATGAACATTCCGTGGTTGACTAGGGATAATGTTGCTAGCCACTTGCAGAAATACCGGCTCTACCTGGGTAGGCTGCAGAAGGATGGTGATCGGAATGCTTCCTCAAGTGGAATTCAGCATTCAGATTTACCTGCAAAAGATGCTGCAGGAAGTTGTAGTTTTCAGAACCCAATAAACAGGCAACAAAACGATGTTTCAGTTGATAGCTGCAAATTTTCAGATGGAAAATTACAAGTTCAGAATGTGGATGCTAGAAGTCATGAAGGTGGTATTAATGGAATCATTTCAGAACCTACGATAGATAAATCGACAGATTTGACTGGTAACATTCATGATACACATATAAGGAGGAGTTCACAGAAGGGCCATGATCAATCTTTTGGACATCCAGATTCAGAAAGAAACTATGCAACGTTTGATTGTGTTACCCCGACACAGTACTGTTGCAATGTATTTCCAGAAATGCAACTTAAAAAACAGAAGTCATGCCTTTCATTAAAGGATAGCTTCAGCCAGTTGCCATTACACAGTACACAGCATCACATTCAGGTCGATCAACCACAAACGACTGCTTCAATTAGTTCCAACTCCTCAGGGTTAGTGGGAGAAACTGCTGCCTGTATTGAAACCAAGCCTTTGTATGCTGATTACACGAGTGATTATGCCGGTTCCTTGGGTTCAATATGGAATGCAGACACCTTTTCTATGCAGTCCAAGAGCTTTACGGTGAATGATCCATGTTTAGAGACCAATACTACCTCGAATACTAGCACGAAAACACAGGGCTTTAATCCCAGTTGCATTTCTGACCTGGAATTTAACAAACGAAACCTACTTTTGGGAGGTGAGGTAGCTTCTGCACCTATGGAGGACTTGAAATCCATTTGGCTACAAGGTGAATGCTATAATATGAACTCTGGACTGCAGAATATACAGATGCCAGAGTATTATGATCCAGGGCTCATTGGAGAAGTGCCAAATCTCTTCTATGATATGGCAGATTGTTCAGCAGTAGATCAAGGCATGATCTGCTCTTCTCTTTCTTGCATCTTCAACAAATAA 1809 0.4168 MQSTCTATRQYFTSSVIMDNSGFSSRRDAFPAGLRVLVVDDDLTWLRILEKMLKKCSYEVTTCCLAREALNLLRERKDGFDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETRRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKRMHETREFGSLEAFEGIRSMRDGSDQFDDGNLFSLEDMTSTKKRKDPDNKHDDKEFRDHSSTKKPRVVWSVDLHQKFVKAVNQIGFDKVGPKKILDLMNIPWLTRDNVASHLQKYRLYLGRLQKDGDRNASSSGIQHSDLPAKDAAGSCSFQNPINRQQNDVSVDSCKFSDGKLQVQNVDARSHEGGINGIISEPTIDKSTDLTGNIHDTHIRRSSQKGHDQSFGHPDSERNYATFDCVTPTQYCCNVFPEMQLKKQKSCLSLKDSFSQLPLHSTQHHIQVDQPQTTASISSNSSGLVGETAACIETKPLYADYTSDYAGSLGSIWNADTFSMQSKSFTVNDPCLETNTTSNTSTKTQGFNPSCISDLEFNKRNLLLGGEVASAPMEDLKSIWLQGECYNMNSGLQNIQMPEYYDPGLIGEVPNLFYDMADCSAVDQGMICSSLSCIFNK 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0322 602 CDD REC_typeB_ARR-like 36 150 - -
Bisa01g0322 602 PIRSF RR_ARR_type-B 14 584 IPR017053 GO:0003677|GO:0003700|GO:0009736
Bisa01g0322 602 SMART REC_2 34 146 IPR001789 GO:0000160
Bisa01g0322 602 FunFam Two-component response regulator 212 275 - -
Bisa01g0322 602 Gene3D - 212 275 - -
Bisa01g0322 602 Pfam Response regulator receiver domain 36 145 IPR001789 GO:0000160
Bisa01g0322 602 Gene3D - 34 188 - -
Bisa01g0322 602 PANTHER TWO-COMPONENT RESPONSE REGULATOR 34 353 IPR045279 GO:0009736
Bisa01g0322 602 ProSiteProfiles Response regulatory domain profile. 35 150 IPR001789 GO:0000160
Bisa01g0322 602 Pfam Myb-like DNA-binding domain 218 268 IPR001005 -
Bisa01g0322 602 SUPERFAMILY Homeodomain-like 214 272 IPR009057 -
Bisa01g0322 602 NCBIfam myb-like DNA-binding domain, SHAQKYF class 216 269 IPR006447 GO:0003677
Bisa01g0322 602 SUPERFAMILY CheY-like 33 158 IPR011006 -
Bisa01g0322 602 MobiDBLite consensus disorder prediction 190 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0322 Bisa-ChrBisa01 4398863 4404394 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0322 28 282 Response Regulator Gene Family AT2G25180 56.589 2.10e-83 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Bisa01g0322 Response_reg 2.3e-23 CL0304