Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0298 ATGGCTTCATCATCATCATCATCATCATCATCATCATCATCCTTCAAAGGGTATGAACCCAACCAGACCCAGATGGTTCTGTCTCTTCTTCAGAGAAACACTTCTCCTTCTAATGAGAAAAGAGGCAGAAGAAAGCAGTCAGAACCAGGGAGGTTCCTTGGGGTCAGAAGACGTCCATGGGGTCGATATGCTGCTGAAATTAGAGACCCAACAACAAAAGAAAGACATTGGCTTGGCACTTTTGACACTGCTCATGAAGCTGCTCTGGCTTATGACAGAGCTGCTCTCTCCATGAAAGGAAGCCAAGCCAGAACCAACTTTATATACTCTGACACTACGCCTTTTCACACTCTTCTCACTCCTTTTGATCCCCACACTCTTTTACCTTCTTCCTCTTCTTCTTCTTCCCAGTTTCTCACTAACACTCAGAATAACAGCATGTCTCATATTGATCACACTCCCAGTTCTGCCCACATTGAGACTGAGCCTAATCCTTCAAATTCTGCAAATGGGTCAGCTGAAAATGACAACTTTTTCTTGTTTTCCAGCGATTCTAACTCAGGGTACTTGGAATGTGTGGTGCCTGATAACTGTTTGAGAAAGAACAGTAATGTGAGTGGGTCAAGTGACAAAAAGGGCCAATCTGAAGAAGGCTTGAACGTCCCAACAATGGCATCTGAAAAAAGTTCAGATTTTTCTTCTTACCCATATGAAGTTAGTCAGGGATATACATGGGATTTGGATTACAGTGAGCTTTCAGCTATCTTTAAGAGCAACAATCCAATGAGGATCAATGAAAATGAGTGCTTCATGGGTGGTAATAATGCTTTGTTTCCTTCCATCACAGAGAGTTCAAGCTATGGGCTAATGACTGATCATTCTGCTTCTTCTTCAACTACCTTTGGAGATGTTGACATGGGATACTCTCTCTTCTGA 936 0.4252 MASSSSSSSSSSSSFKGYEPNQTQMVLSLLQRNTSPSNEKRGRRKQSEPGRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMKGSQARTNFIYSDTTPFHTLLTPFDPHTLLPSSSSSSSQFLTNTQNNSMSHIDHTPSSAHIETEPNPSNSANGSAENDNFFLFSSDSNSGYLECVVPDNCLRKNSNVSGSSDKKGQSEEGLNVPTMASEKSSDFSSYPYEVSQGYTWDLDYSELSAIFKSNNPMRINENECFMGGNNALFPSITESSSYGLMTDHSASSSTTFGDVDMGYSLF 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0298 311 ProSiteProfiles AP2/ERF domain profile. 51 108 IPR001471 GO:0003700|GO:0006355
Bisa01g0298 311 SMART rav1_2 51 114 IPR001471 GO:0003700|GO:0006355
Bisa01g0298 311 CDD AP2 51 107 IPR001471 GO:0003700|GO:0006355
Bisa01g0298 311 SUPERFAMILY DNA-binding domain 52 109 IPR016177 GO:0003677
Bisa01g0298 311 MobiDBLite consensus disorder prediction 1 53 - -
Bisa01g0298 311 MobiDBLite consensus disorder prediction 37 52 - -
Bisa01g0298 311 MobiDBLite consensus disorder prediction 1 36 - -
Bisa01g0298 311 MobiDBLite consensus disorder prediction 129 173 - -
Bisa01g0298 311 Pfam AP2 domain 54 100 IPR001471 GO:0003700|GO:0006355
Bisa01g0298 311 Gene3D AP2/ERF domain 51 109 IPR036955 GO:0003700|GO:0006355
Bisa01g0298 311 FunFam Ethylene-responsive transcription factor 2 51 109 - -
Bisa01g0298 311 MobiDBLite consensus disorder prediction 204 231 - -
Bisa01g0298 311 PRINTS Ethylene responsive element binding protein signature 52 63 IPR001471 GO:0003700|GO:0006355
Bisa01g0298 311 PRINTS Ethylene responsive element binding protein signature 74 90 IPR001471 GO:0003700|GO:0006355
Bisa01g0298 311 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 33 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0298 Bisa-ChrBisa01 4023661 4024596 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0298 16 304 AP2-EREBP Transcription Factor Family AT5G18560 38.571 4.43e-59 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa01g0298 AP2 2.7e-12 CL0081