Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0284 ATGGAAGGTTTCAGAAGCGACTCTGTGAAGCCATTCCCACCAATTGTTGAAGCTCCACCTTCTTCTGATGAACCTGTTGTAGTCGCCATGGCTGAAACTGGGAACACCTCCAGAAAACGCAGTAGACAAGTGGGCTTAGAGAGGACGGAGAGCCTTGTGATGGAGCGGGATCGAAGGTTGAAGATGAGTCAGATGTACGCTCAGCTTCAATCCACGGTCCCTGGTCTCTTTTCCAAGGTTACAAGAGAAGTGATTGTCAACGAAACAATAAACTACATCAAGGACCTTGAAAAGAAGAAGAAAAGATTGGAAGAGCTTAAGAGGTCAACAATAGAACCAGAAGTAGCTGAAAGGAAGATGATGCTTCAATGTACAAGCAATAGGAATTCCTCCATTACAGTCACAGTATCTGGCAACACTGCCTTCTTTGGGATTCAATCAAAAGCTCAGTCTGGTTTAGTCACAGTGATTTTCAAGGTGTTCTTCAAGCATAATGCTGAAATCTTGGCTGCAAATGTTTCAGTCAACAATGGAGAATTGACGTTGGCAATTACAGCTGCATTGGATCATAATAATGGTGATGATGGAAATGTTACAGCTGATAAGATTAAGACAGAGATTCTGAGTTTGTAG 633 0.4265 MEGFRSDSVKPFPPIVEAPPSSDEPVVVAMAETGNTSRKRSRQVGLERTESLVMERDRRLKMSQMYAQLQSTVPGLFSKVTREVIVNETINYIKDLEKKKKRLEELKRSTIEPEVAERKMMLQCTSNRNSSITVTVSGNTAFFGIQSKAQSGLVTVIFKVFFKHNAEILAANVSVNNGELTLAITAALDHNNGDDGNVTADKIKTEILSL 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0284 210 Coils Coil 86 109 - -
Bisa01g0284 210 CDD bHLH_SF 55 95 - -
Bisa01g0284 210 Gene3D - 36 110 IPR036638 GO:0046983
Bisa01g0284 210 PANTHER BHLH DOMAIN-CONTAINING PROTEIN 34 199 IPR044278 GO:0003700|GO:0006355|GO:0009960
Bisa01g0284 210 SMART finulus 52 102 IPR011598 GO:0046983
Bisa01g0284 210 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 50 112 IPR036638 GO:0046983
Bisa01g0284 210 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 46 96 IPR011598 GO:0046983
Bisa01g0284 210 Pfam Helix-loop-helix DNA-binding domain 53 97 IPR011598 GO:0046983
Bisa01g0284 210 MobiDBLite consensus disorder prediction 1 24 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0284 35 186 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09820 26.974 9.97e-08 49.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa01g0284 HLH 3.5e-06 No_clan