Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0280 ATGGGGTGTGTGTTCGGGAGAGAGGCGTCGGACAAGTCCGTCGGAGAGACTGTGGTGGAGAGGGAGGAAAAGAGGGAGGAGAGGAAAGAGGAAGTTAAAGCTGCTAAAGCAGAAGTGAGTGAAGTTCAAAATGGTTGGAATCGGAAGGAAGGTGGAGAGGAGAAAAGTACTCGGCCGAAAGGGGAACGGCGGCGATCGTCGAGGCCGAATCCGAGATTGAGCAATCCACCGAACCATGTACATGGCGAGCAAGTGGCTGCGGGATGGCCCTCTTGGCTCTCCAAGGTTGCAGGGGAAGCCATAAACGGGTTGACGCCTAGAAGAGCGGACACTTTTGAGAAGCTTGATAAGATTGGGCAAGGTACATACAGTAACGTTTACAAAGCCAGAGATACTTTATCGGGGAAAATTGTTGCGCTTAAGAAGGTTCGGTTTGACAATTTGGAGCCAGAGAGTGTGAAATTCATGGCCAGAGAGATTCTCATATTACGTCGTCTGGATCATCCCAATGTTGTCAAACTGGAAGGTTTAGTGACGTCTAGAATGTCGTGTAGTTTGTATCTTGTGTTTGAATACATGGAACATGATTTGGCTGGACTTGCTACAAGCCCAACAATTAAGTTCACTGAGCCGCAGGTCAAATGTTACATGAGTCAGCTGTTTTCTGGTTTGGAACACTGTCACAACCGTCATGTGCTGCATCGCGATATAAAGGGGTCAAACCTTCTTATTGACAATGAAGGAATTCTTAAAATTGCTGATTTTGGATTAGCGTCCTTCTTTGATCCTAATCACAAGCACCCCATGACAAGTAGGGTGGTGACGTTGTGGTACCGACCTCCAGAACTTCTTCTTGGAGCTACTGATTATGGTGTTGGAGTGGACCTCTGGAGTGCTGGCTGCATTCTTGCTGAACTGTTGGCCGGAAAGCCTATTTTGCCGGGTCGAACAGAGGTGGAGCAGCTACATAAGATATTTAAGCTATGTGGTTCTCCTTCTGAAGAGTATTGGAAAAAGTCAAAGTTGCCTCATGCTACCATTTTTAAGCCCCAACAATCATACAAGCGGTGCATAGCAGAGGTATTTAAAGATTTTCCACCATCATCCTTGCCACTAATTGAGACCCTTCTTGCAATTGATCCAGCTGAACGTCAGACTGCCACTGCTGCATTGCAAAGTGAATTCTTTACAACAAAACCTTATGCTTGTGAGCCATCTAGCCTTCCCAAATATCCTCCCAGCAAGGAGATGGATGCAAAGCTACGAGATGAAGAAGCTAGAAGATTGAGAGCAGCTGGTAAAGCTAATGCCGATGGTGTGAGGAAGTCTCGTCCACGTGACCGAGCAGGGAGGGGAATTCCAGTTCCAGAAGCCAATGCTGAGCTTCAAGCAAATATTGATAGACGGCGATTGATAACACATGCAAATGCTAAGAGCAAGAGTGAGAAGTTTCCTCCTCCCCACCAAGACGGAACTCTAGGCTATCCTTTGGGTTCCTCGCATCACATGGATCCAGTTTTTGATCCTCCTGATGTTCCATTTAGTTCTACAAACTTCTCATATCCTAAAGCCAATATTCAAACCTGGTCCGGCCCATTGGTCGAACCTGCTGGTGTGGGTGCACCAAGGAGAAAGAAGAACATGGCAGGTGAGTCAAAGTCATCAAAGAAGGACTCAAAGAGATAG 1686 0.468 MGCVFGREASDKSVGETVVEREEKREERKEEVKAAKAEVSEVQNGWNRKEGGEEKSTRPKGERRRSSRPNPRLSNPPNHVHGEQVAAGWPSWLSKVAGEAINGLTPRRADTFEKLDKIGQGTYSNVYKARDTLSGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFEYMEHDLAGLATSPTIKFTEPQVKCYMSQLFSGLEHCHNRHVLHRDIKGSNLLIDNEGILKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPILPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQSYKRCIAEVFKDFPPSSLPLIETLLAIDPAERQTATAALQSEFFTTKPYACEPSSLPKYPPSKEMDAKLRDEEARRLRAAGKANADGVRKSRPRDRAGRGIPVPEANAELQANIDRRRLITHANAKSKSEKFPPPHQDGTLGYPLGSSHHMDPVFDPPDVPFSSTNFSYPKANIQTWSGPLVEPAGVGAPRRKKNMAGESKSSKKDSKR 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0280 561 CDD STKc_CDK9_like 112 396 - -
Bisa01g0280 561 MobiDBLite consensus disorder prediction 1 83 - -
Bisa01g0280 561 MobiDBLite consensus disorder prediction 513 527 - -
Bisa01g0280 561 SUPERFAMILY Protein kinase-like (PK-like) 107 401 IPR011009 -
Bisa01g0280 561 PANTHER CELL DIVISION PROTEIN KINASE 110 400 - -
Bisa01g0280 561 SMART serkin_6 112 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g0280 561 MobiDBLite consensus disorder prediction 546 561 - -
Bisa01g0280 561 MobiDBLite consensus disorder prediction 47 69 - -
Bisa01g0280 561 MobiDBLite consensus disorder prediction 430 561 - -
Bisa01g0280 561 FunFam probable serine/threonine-protein kinase At1g54610 99 194 - -
Bisa01g0280 561 MobiDBLite consensus disorder prediction 13 37 - -
Bisa01g0280 561 MobiDBLite consensus disorder prediction 463 485 - -
Bisa01g0280 561 FunFam probable serine/threonine-protein kinase At1g54610 195 436 - -
Bisa01g0280 561 ProSitePatterns Protein kinases ATP-binding region signature. 118 141 IPR017441 GO:0005524
Bisa01g0280 561 Gene3D Phosphorylase Kinase; domain 1 100 194 - -
Bisa01g0280 561 Coils Coil 18 45 - -
Bisa01g0280 561 Pfam Protein kinase domain 112 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g0280 561 ProSiteProfiles Protein kinase domain profile. 112 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g0280 561 MobiDBLite consensus disorder prediction 430 451 - -
Bisa01g0280 561 ProSitePatterns Serine/Threonine protein kinases active-site signature. 232 244 IPR008271 GO:0004672|GO:0006468
Bisa01g0280 561 Gene3D Transferase(Phosphotransferase) domain 1 195 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0280 Bisa-ChrBisa01 3725489 3730344 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0280 107 434 Core Cell Cycle Gene Families AT5G10270 52.326 1.35e-118 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Bisa01g0280 Pkinase 2e-68 CL0016