Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0277 ATGCCTTTAATTCGGAGCCTAATCCACGATATGAGATCGAGGTCGCACCGCGTGGTCCAGGACGGTTCCTCCATGGACGAGGTGGTCACCGATGGCTTGAAGCAGAGTTCCTGGGTCCACATGCCGCAGGAGCTGCTCCGGGAGGTTTTGCTCCGGATTGAGGGGTCCGAGAGCGCTTGGCCGCCCCGCAAGAGTGTGGTGGCTTGCGCCGGAGTGTGCCGGAGTTGGAGGGAGATCACCAAGGAGATCGTCAAGACACCTGAGGTTTCCGCTAAGATCACTTTTCCGATCTCCGTCAAGCAGCCTGGCCCGAGGGAGCATCTTCTTCAGTGCTTTATAAAGCGCAACCGTTCCTCCCAGACATATTTTTTATTTCTCAGTTTAACTAATGCTTTAGCTGATGACGGGAAGTTTCTTTTGGCTGCACGCAAGTGTAGACGTCCCACCTGCACGGATTATATCATCTCTCTAGATGCAGATGATATGTCAAATGGAAGCAGCACATATGTTGGGAAACTGAGATCAAATTTTCTGGGAACAAAGTTCACAATCTATGATGGCCAGCCACCTCATGCAGGTGCAAAAATTATAAAAAGTCGCTCCACTAGGCTGGTGAATCTGAAGCAAGTTTCACCCAGGGTCCCCACTGGTAACTATCCAGTGGCCCACATTTCATATGAATTAAATGTGCTAGGCTCCAGGGGTCCTAGGAGAATGCATTGTGTCATGGATGCCATTCCTGCGTCTGCAATTTTACCGGGAGGGGTAGCCCCTACACAGACTGATTTTTCCCTTAGCAACATTGACATGTTCCCTTCATTTCCATTTTTTCGGTCAAAATCAAATCGTTCGGAAAAATCCCCATCTGGACCCCTGGGCGATAAAAAAGATGAGGTGCTAGTGTTGAAAAACAAATCACCCAGGACCAGAACACGACAAGATAATCCTCCAATTTGGAAAAGTTGGAAAAGATTTGTTTACAATGGATTACCGGTACCCCATCTCAGCATTTCAAGCTTTTGCAATCTGCCTTAG 1035 0.485 MPLIRSLIHDMRSRSHRVVQDGSSMDEVVTDGLKQSSWVHMPQELLREVLLRIEGSESAWPPRKSVVACAGVCRSWREITKEIVKTPEVSAKITFPISVKQPGPREHLLQCFIKRNRSSQTYFLFLSLTNALADDGKFLLAARKCRRPTCTDYIISLDADDMSNGSSTYVGKLRSNFLGTKFTIYDGQPPHAGAKIIKSRSTRLVNLKQVSPRVPTGNYPVAHISYELNVLGSRGPRRMHCVMDAIPASAILPGGVAPTQTDFSLSNIDMFPSFPFFRSKSNRSEKSPSGPLGDKKDEVLVLKNKSPRTRTRQDNPPIWKSWKRFVYNGLPVPHLSISSFCNLP 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0277 344 CDD F-box_AtTLP-like 38 82 - -
Bisa01g0277 344 Gene3D Tubby Protein; Chain A 98 314 IPR025659 -
Bisa01g0277 344 PANTHER TUBBY-RELATED 25 308 - -
Bisa01g0277 344 SUPERFAMILY Tubby C-terminal domain-like 87 308 IPR025659 -
Bisa01g0277 344 Pfam F-box domain 40 85 IPR001810 GO:0005515
Bisa01g0277 344 SUPERFAMILY F-box domain 31 81 IPR036047 GO:0005515
Bisa01g0277 344 Gene3D - 31 86 - -
Bisa01g0277 344 PRINTS Tubby superfamily signature 218 245 IPR000007 -
Bisa01g0277 344 PRINTS Tubby superfamily signature 153 169 IPR000007 -
Bisa01g0277 344 PRINTS Tubby superfamily signature 169 193 IPR000007 -
Bisa01g0277 344 Pfam Tub family 99 308 IPR000007 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0277 Bisa-ChrBisa01 3713505 3716046 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0277 12 308 TUB Transcription Factor Family AT2G47900 69.000 1.55e-140 402
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TUB Bisa01g0277 Tub 6.7e-59 CL0395