Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0257 ATGAAGACGAATGGTATACTCCTTCAACTTCAAGGGGTTGCAGATCAAGGGCTGGGTTTTCTTTTACCGTTTCAGAAAGTGGTAAATTATGATTCTTCTTTCCTACCCTTGGGTGTGATGAGGCTTTCCTCTAAACATCATAAGATCATTGTTTATTGTACTAATGCTAGAATGCATATCATGATAGACTTGAGATCTTTAGACTCTGTGGAGCAACGCATACCTGAGTGTTCTACTAGTGGGGAACTTGAAGATTGCACAAGCAGTTTAGAAATTAAATCCCCTATTTCCAGGTCCAGCACTTCTGATTCAGAGAGTCAGGCAAACAATACCCACTGGCAAGGTTTCGTTCGTTTGCTGAAGAGAGGGTCCCGAATGCCTTTCCAATCCTTTACTACTCCACCTAAAAGTGTCCCCTTAATTATTCCACCTAAAAGTGTTCCAAAACTCACCAGAAGACATAGTAAGAGATTCAGGGACGACGAGATCCCAATTATAAATTCTCCACCATCAAATTCTCCACCATCGAATCCTTCACCTCTGAAGGTAGCTTTGAGTCCTGACTTGTACTGCCTCAAAGCTTCCTGGAAGAATTTCTCTCTCACAGAGATCACGGATGCAACCAACGACTTCAGCCCTGATAATTTGATTGGTATGGGAGGTTATGCTGAGGTTTACAAAGGCAAAATGGAAGATGGGCAGTTTGTTGCGATTAAACGGCTTACAAGAGGAAGCCAAGAAGAAATGACCGCAGACTTCTTGTCTGAGCTTGGAATTATAGTGCATGTGGACCATCCCAATATTGCTAGATTGATTGGATATGGTGTTGAAGGGGGAATGTTTCTTATTCTTCAGTTGTCTCCACATGGAAGCCTAGCATCCATACTTTATGGACCTCGAGAGAAGCTAGATTGGAGAAAAAGATATAAGATTGCTTTTGGGACTGCTGATGGCCTTCGCTATCTGCATGAAGAATGTCAAAGAAGGATAATTCACAGAGATATCAAGGCCGCTAATATTTTGCTCTCTGAGGATTTTGAAGCTATGATATCTGATTTTGGGCTTTCAAAGTGGTTACCTGACCAATGGACTCACCATACTGTCTCAAAGATTGAAGGCACGTTCGGCTACCTTCCTCCAGAATTCTTCATGTATGGCTTGGTAGATGAAAAGACTGATGTTTATGCTTATGGAGTGCTATTATTGGAGCTCATTACTGGACGACAAGCTCTGGATAGCTCACAGAAAAGTTTGGTGATGTGGGCAAAACCTAAGCTATCTTCAAATAACATCAAAGAGCTTGTTGATCCATGTCTGAATGATGATTATGATGAAGAACAGATGAGCATCGTAGCTTTTACAGCTTCGTTGTGTATTGATCAATCTTCAGCCCAACGACCACATATGAGCCAGGTATTAAGGATTCTAAAAGGTGAAGAAGACATGGGGATGATGAAAGTATACCAGAAGTCCAAAATTCAAAGGACGTTTTCTGATGAACTCTGCGATGCAGAAGAGTACAACTCAACCAAGGTTTTAAATGATATGGATAGACACATGGAGACTCTTCTAGCCAACTGTTACTCTGTAGAGGATTCCTATCTCGGGTTCTGGAAGGAGAGATGCGTTTGGGTGTGCCACGTGTTACCGTCTGACGCTAGAAACGAGAGGGACACGTGGCAAGCTACGGCGAGATGCGGCTTGATCGGTCCTTCCAAGTACATTGGAAATGCAGACGAGCGGGACGCGAAATCTCTTATTTGA 1764 0.4263 MKTNGILLQLQGVADQGLGFLLPFQKVVNYDSSFLPLGVMRLSSKHHKIIVYCTNARMHIMIDLRSLDSVEQRIPECSTSGELEDCTSSLEIKSPISRSSTSDSESQANNTHWQGFVRLLKRGSRMPFQSFTTPPKSVPLIIPPKSVPKLTRRHSKRFRDDEIPIINSPPSNSPPSNPSPLKVALSPDLYCLKASWKNFSLTEITDATNDFSPDNLIGMGGYAEVYKGKMEDGQFVAIKRLTRGSQEEMTADFLSELGIIVHVDHPNIARLIGYGVEGGMFLILQLSPHGSLASILYGPREKLDWRKRYKIAFGTADGLRYLHEECQRRIIHRDIKAANILLSEDFEAMISDFGLSKWLPDQWTHHTVSKIEGTFGYLPPEFFMYGLVDEKTDVYAYGVLLLELITGRQALDSSQKSLVMWAKPKLSSNNIKELVDPCLNDDYDEEQMSIVAFTASLCIDQSSAQRPHMSQVLRILKGEEDMGMMKVYQKSKIQRTFSDELCDAEEYNSTKVLNDMDRHMETLLANCYSVEDSYLGFWKERCVWVCHVLPSDARNERDTWQATARCGLIGPSKYIGNADERDAKSLI 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0257 587 Gene3D Transferase(Phosphotransferase) domain 1 288 501 - -
Bisa01g0257 587 PANTHER OS08G0249100 PROTEIN 78 519 IPR046958 -
Bisa01g0257 587 SMART serkin_6 211 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g0257 587 MobiDBLite consensus disorder prediction 159 180 - -
Bisa01g0257 587 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK1 187 286 - -
Bisa01g0257 587 Pfam Protein tyrosine and serine/threonine kinase 215 475 IPR001245 GO:0004672|GO:0006468
Bisa01g0257 587 ProSitePatterns Serine/Threonine protein kinases active-site signature. 330 342 IPR008271 GO:0004672|GO:0006468
Bisa01g0257 587 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 288 492 - -
Bisa01g0257 587 ProSiteProfiles Protein kinase domain profile. 211 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g0257 587 Gene3D Phosphorylase Kinase; domain 1 186 285 - -
Bisa01g0257 587 ProSitePatterns Protein kinases ATP-binding region signature. 217 239 IPR017441 GO:0005524
Bisa01g0257 587 SUPERFAMILY Protein kinase-like (PK-like) 193 476 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0257 Bisa-ChrBisa01 3485483 3489194 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0257 186 536 Trihelix Transcription Factor Family AT1G70460 38.965 5.78e-72 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Bisa01g0257 PK_Tyr_Ser-Thr 2.8e-41 CL0016