Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0233 ATGCTTGTCAATTGGGACTCTGAATTCAGAGCTTACCTGAGTCTGCTACGTTCTGGTGTTTGGAGGAAGATGAATGAAAAGAATGTGATCATGAAGAACGAAGAGACAAGGACTGCTTTGCCAGTGAACAGTATGACAATGGTGAGAGTTAGTGTCCTAAATGATGCTCTCAAGAGTATGTACAATGCTGAGAAACGGGGGAAACGTCAGGTCATGATTAGGCCATCCTCAAAAGTGATCATTAAATTCCTTTTGGTGATGCAGAAGCATGGATACATTGGAGAGTTTGAGTATGTGGATGATCACAGGGCTGGCAAAATCGTGGTTGAATTGAATGGAAGATTGAACAAATGTGGGGTTATTAGTCCCCGTTTTGATGTGGGTGTCAAGGAGATAGAACCTTGGACTGCAAGGCTGCTTCCCTCAAGACAATTTGGCTATATTGTCTTGACTACCTCTGCTGGTATTATGGATCATGAAGAGGCTAGGAGAAAGAATGTTGGCGGTAAAGTGCTGGTAGTATCTATAAGTAAATCTAGGGTTGCTTGGGAGGCTAGATTGAAGAAAAAGGAAGAAGTCTGGAAAGGACCTGATTACAATATGGGAGCGATTTTAGAATACCATGATTGGTATCCTCCAGTCAGGATTAAATGTTTCTTTCTTGCATCTCATATTCTCCTTTCCAATTTATTGTTAAAGCGATGA 705 0.4142 MLVNWDSEFRAYLSLLRSGVWRKMNEKNVIMKNEETRTALPVNSMTMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEPWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLVVSISKSRVAWEARLKKKEEVWKGPDYNMGAILEYHDWYPPVRIKCFFLASHILLSNLLLKR 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0233 234 FunFam 40S ribosomal protein S15a 47 115 - -
Bisa01g0233 234 Gene3D - 47 115 - -
Bisa01g0233 234 PANTHER 40S RIBOSOMAL PROTEIN S15A 47 173 IPR000630 GO:0003735|GO:0005840|GO:0006412
Bisa01g0233 234 Pfam Ribosomal protein S8 53 173 IPR000630 GO:0003735|GO:0005840|GO:0006412
Bisa01g0233 234 ProSitePatterns Ribosomal protein S8 signature. 146 163 IPR000630 GO:0003735|GO:0005840|GO:0006412
Bisa01g0233 234 Gene3D - 116 174 - -
Bisa01g0233 234 SUPERFAMILY Ribosomal protein S8 50 173 IPR035987 GO:0003735|GO:0005840|GO:0006412
Bisa01g0233 234 FunFam 40S ribosomal protein S15a 116 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0233 Bisa-ChrBisa01 3179551 3181186 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0233 47 172 Cytoplasmic Ribosomal Protein Gene Family AT5G59850 96.825 1.20e-87 253