Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0219 ATGGGAATTTCTTGGAGTAGCAGAAGAAGAGACAATTATTTTCACAACCCACATCTTCCATCGCCTTACTATTACTCTGCAGAATCTCCTCCTCCTCAGCCTCCACCGCCGCTGCCGCTGCCGCTGCAAGGCTACTATTTCACCTCAACCGCGCCTTATAATACACTGCACAACAATAGCTATGTCACTCCGCCTCCTCTGCCTCCACCTCTTCAGACCCACCTCTTCTGTTACTCGAATGTGTACAGCCATTGTTCCAATTATGCTAATTCCATTGGGGGTAGGGTTCATTATCAACCTTATTATGTAAATCATGCTAGTGGGTGGCCTGCAATTTATCCTTCGGTTGGTCCTGTCGTCTCGCCACCACCCTATGTTGATAATCGAAATGCTAAGAAGGTGAGGAACGATGTCAATGTGCATAAAGATACGGTGCGGCTGGAGATGGATGAGCATAACCCTGATCAGCTCTTGGTTTCATTCGTTTTCGATGCCTTATATGATGGAAGCATAACTATATTCTACTTTGCAAAGGAAGAAGAAAAATGTAGGTTTGCACCACTATTTCCTGATGTATTTGAGCCAATAACAGTTGCCTTTCAGAGAGGAATTGGCCAGAAATTTTGTGCGCCGTCAGGAACAGGCATTGACTCACGGTTCTTTGAGTTGGATGACCTCTCAAAACCCTCACTTGGAGAAGATGTCTTTCCCATTGTAATATGTGCTGAAACATGTTTGAGAACTTCGGCAGATGAAAATCTTGGGAATTCCATCCTAGATGTATCCCCTCACATGCAGATTACTCAAGCCATAGTAGAGAAAGGCAATGGCAGTGGTTATTTCAAGGTAAAAGTAGACAGGCAGATTCTGTGGATTGATGGTGTTCGTTATGAGTTAAGAGAGTTATATGGAATAGGAGGCTCAGAACCAGCAGGCTTTGACGGCAATGATCCTGGGAAGGAGTGTGTAATATGCATGACTGAACCAAAAGACACTGCTGTCTTACCTTGTCGACATATGTGTATGTGTGGTGAGTGTGCACAAGCTTTGTGGCTTCAATCAAATAAATGCCCTATATGCCGTCATCCTATCGAGGAACTTATAGAGGTCAAGATAAACAATGGCGATTATTGGGATTTTTTCTCTAGGTGCTAA 1155 0.4398 MGISWSSRRRDNYFHNPHLPSPYYYSAESPPPQPPPPLPLPLQGYYFTSTAPYNTLHNNSYVTPPPLPPPLQTHLFCYSNVYSHCSNYANSIGGRVHYQPYYVNHASGWPAIYPSVGPVVSPPPYVDNRNAKKVRNDVNVHKDTVRLEMDEHNPDQLLVSFVFDALYDGSITIFYFAKEEEKCRFAPLFPDVFEPITVAFQRGIGQKFCAPSGTGIDSRFFELDDLSKPSLGEDVFPIVICAETCLRTSADENLGNSILDVSPHMQITQAIVEKGNGSGYFKVKVDRQILWIDGVRYELRELYGIGGSEPAGFDGNDPGKECVICMTEPKDTAVLPCRHMCMCGECAQALWLQSNKCPICRHPIEELIEVKINNGDYWDFFSRC 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0219 384 ProSiteProfiles Zinc finger RING-type profile. 322 361 IPR001841 -
Bisa01g0219 384 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 315 376 IPR013083 -
Bisa01g0219 384 SMART ring_2 322 360 IPR001841 -
Bisa01g0219 384 PANTHER MAHOGUNIN 25 371 IPR045194 GO:0061630
Bisa01g0219 384 SUPERFAMILY RING/U-box 321 367 - -
Bisa01g0219 384 FunFam probable E3 ubiquitin-protein ligase LOG2 306 371 - -
Bisa01g0219 384 CDD mRING-HC-C3HC5_MGRN1-like 320 361 IPR045195 -
Bisa01g0219 384 Pfam Zinc finger, C3HC4 type (RING finger) 320 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0219 Bisa-ChrBisa01 2919557 2922965 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0219 94 376 C3H Transcription Factor Family AT3G06140 57.770 6.56e-103 306