Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0202 ATGAGTCTCGTCAGTGTAGGACAATTGATGAGCGCCCAGCACCTTGTTCGTCCAGGCAAAATCGTCATATGGGAAAAAGTCCTACGAAAAGTTAATGCATTAAAACGAACCAGACTCGCGCTTCCTTCTTGTGCTTACTTTAACTCTTCCTCTTCTTCTTCTTCCCCACTCCATCTCTCTCTCCCTCCGTCTGCTTCCGAAATCCACGAAAAGTTCAGTTTCGAAGAAGATCCAGATATTCAAATCCATTCAAAGCCAAGACTAGTTGTCTCAACTCTTTTGTTCTCGTGGTTCTCTTCTGGGTCTGAATTTGGTGTACGCAGTATTGTGCATAGGAGTATTTGTAAAGTTCATAACAACAGCATGGATCAAAACCAGCTCGGGCTGCCAACCGGAGGAGTGTCTGGTTCTGCTGCACAAGGGCCATATGGCATGAATCAATATCAATCTAACCAACTGATCAGCAATATCAGTCCCACTCAAGCAGCAGCAGCAGCAGCAGCAGGAGGAGCAGGTCTCCCTGCCTCATCATCCTTCCTGCAGAGAGATCAGCAATATGCTCACCAGTACATCCATCAGCTACAGCAACAAGAGCTGCAGCAACAACTCCAGACCTTCTGGGCAAATCAGTACCAAGAAATTGAGCAGATCACTGATTTTAAGAACCACAGCCTGCCTCTGGCTAGGATCAAGAAGATCATGAAGGCTGATGAGGATGTGAGAATGATATCAGCAGAGGCTCCAGTTATATTCGCCAGGGCCTGTGAAATGTTCATTCTGGAGCTCACACTGAGGTCTTGGATCAACGCAGAGGAGAACAAGAGGAGGACGCTTCAAAAGAATGACATTGCTGCAGCAATCACAAGGACTGATGTGTTTGATTTTCTGGTGGATATCGTGCCAAGGGATGACTTGAAGGATGAGATATACTCAGGGGTCCCCAGAGCTCCGGCTGAGAATGTTCCTTACTATTATATGCCACCTCAGCAGCAAGTTGCAGGTTCTCCTCAATTTGGTGCTCCAAAAGTGATCATGGGTAGGCCTGTAGGTGATCAAGCTCGTTATGGGCAGCCAACTCACCCTTTCTCTCCTCAAATGTGGCCACACCAACAAAATCCTTCCCCCAACCCAGATTCTTAA 1140 0.4702 MSLVSVGQLMSAQHLVRPGKIVIWEKVLRKVNALKRTRLALPSCAYFNSSSSSSSPLHLSLPPSASEIHEKFSFEEDPDIQIHSKPRLVVSTLLFSWFSSGSEFGVRSIVHRSICKVHNNSMDQNQLGLPTGGVSGSAAQGPYGMNQYQSNQLISNISPTQAAAAAAAGGAGLPASSSFLQRDQQYAHQYIHQLQQQELQQQLQTFWANQYQEIEQITDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWINAEENKRRTLQKNDIAAAITRTDVFDFLVDIVPRDDLKDEIYSGVPRAPAENVPYYYMPPQQQVAGSPQFGAPKVIMGRPVGDQARYGQPTHPFSPQMWPHQQNPSPNPDS 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0202 379 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 177 319 - -
Bisa01g0202 379 Pfam Core histone H2A/H2B/H3/H4 205 287 IPR007125 GO:0003677
Bisa01g0202 379 SUPERFAMILY Histone-fold 199 296 IPR009072 GO:0046982
Bisa01g0202 379 MobiDBLite consensus disorder prediction 348 379 - -
Bisa01g0202 379 Gene3D Histone, subunit A 186 302 IPR009072 GO:0046982
Bisa01g0202 379 FunFam Nuclear transcription factor Y subunit gamma 190 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0202 Bisa-ChrBisa01 2697925 2700941 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0202 143 367 CCAAT-HAP5 Transcription Factor Family AT1G08970 59.307 1.56e-71 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Bisa01g0202 CBFD_NFYB_HMF 9e-17 CL0012