Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0161 ATGATACCTAGGCCAACGAATGACCTGTTGTGGTTAGCTCTAGCTGTTAGATTCTCAGCTAACTCAGCTGTAGGTCTATGTATAATGTGTTACTCCATCCGTCCTATTTCAGATAGGAGAGTTCTTGATTCTTCAATTGCTTTTTCCGGTGTTCAAAGCCTTTCTTCTAGTGTGCAAAGCACTCCTGAGAAAAATGGTCATTCAGATGATGCTTCAAGAAGTCCTGAACTTCTTCAAGAGTTCTTGAAATCTGGTCCAAAGAAGGAACTTCTTCAAACTTGCTTTTCTAAGGACAGAAAGAACCTTTTATCAAAAAGGAAAATGCCTGAAACTAAGTCAACCAGTAAGATAATCAAGAAACAGGACAACAAAAAAGCTTCTAGTCTCAGCAACCAGTCCTGTAGGAAGCAACATAGGAAGAACAAAAACCCTACAAGGCTCAGCCCAGTTGCTGATCAGCCTGCTGATTCTGGACATTCAAACTCCTGGATCTGTAAAAACTCTGCTTGTAGAGCTGTTCTATCTATAGATGACAACTTCTGTAGAAGGTGCTCTTGCAGTATTTGTCACCTTTTTGATGGTAACAAAGATCCTACTCTTTGGTTGGTATGCTCATCTGAATCTGCTGAAGAGGACTCTTGTGGGTCATCTTGCCATATCGAGTGTGCACTTCAGCATGAAAAAGTGGGAGTTGTTGATCTTGGGCAACTGATGCAACTAGATGGTGATTATTGTTGTGTATCCTGTGGTAAAGTTACTGGGATACTTGGATGCTGGAAGAAGCAGCTAAATATAGCAAAAGATGCTCGGCGTGTAGATGTACTCTGTCATAGGCTATATATGAGCTACAAGCTCCTGGATGGGACGTCGAGATTTAAAGAATTGCATGAAATGGTACAACAGGCAAAGGCTATATTGGAAACAGAAGTTGGTCCAGTTAATGGGACTTCTGCTAATATGGTGAGAGGCATTGTCAGCAGCCTCTCTAATGCCAGCGATGTGCAGAAACTCTGCTCTCTTGCTATTGAGAAAGCTGAAGGGTGGCTTGCTAATGTGAATCCAAATTCCAGAGAGGGTTCACTTCCTGCTGCCTGCAAGTTTGTGTTCGAAGAGATAACAGCTTCCTCAGTCAAAATCATTTTGATTGACATGTCTACTACATCTTCTGAGGACATTAAGGGCTACAAGCTCTGGCACTACAAGAGTAGGGAGGAATCAGTTGCAAAAGATCCTGTTTGTGAGTTTCCAAAAGATCAGAAGAGGATTCTCTTATCCAACCTCCAGCCCTGCACCGAATATACTTTTCGTATTATATCTTATACAAATAACGGTGAGCTGGGTTTTTCCGAGGCCAAATGTTTCACCAAGAGTGTTGTAGTTAAAAAAAGTCCTTCTTTATTAGTTGATTTGACTCATAAAATAGAGAACCCTGAAATCGGAGGCGGTTCTTCTGCCTCCAAAGCTGAACCCAATCCCACAGTGGAAGATTCGGGATTTAAGGTTCGGGACCTTGGGAAAGTTTTGCGTCTTGCTTGGGCTCAAGAACAAGGTCACTTTGATGAGTTTTGCTGTGTTGATACCGAAAATTGCTGCAGAGAAACTGAAATGATCAAGCCTAAAAATTCAGAAGAACAGTTGCCTGCAGTTTCAAGGGGCCTTGATTTAAATGTTGTTTCAGTGCCTGATCTAAATGAAGAACTAGTGCCTCCTGAGTCTTCCAGGGATGAAAATAATGGCTTCACTGTGCAGAAGGCTGTTAAGGCAGATGATGATGCTGCTTCTCGTGATGCACAGAAAAATGATTTAGCAAAATCGCATGGTAGTGGTGACTCCCAAACCTGTATAAATGGGCCAACCAGAGAAGTTCCGGCTGTTGACTCCCGCACAGATGCTAGTAGGAAAAGGGTAGCTAGCACAAATGAAGAGACACATGACTGCAATAGCACTTTGGCAAATGGCTCTCCTTTAGGCATATCTGATGGTACATGCTCCCTGGATGAGAACTATGAGTACTGTGTGAAAGTAATTCGCTGGCTAGAATGTGAGGGTCACATCAAACAGGAATTTAGGTTGAAGTTGCTAACATGGTTTAGTTTGAGGTCGACAGAGCAGGAACGCCGGGTGGTTAATACCTTCATTCAAACTCTGCTTGATGATCCAAGTAGTTTGGCAGGACAATTGGTTGACTCATTTTCTGATATTATATCCAACAAGAGGCCTAGAAATGGATTGTGTAGTAAGCTGTGGCATTAG 2253 0.4239 MIPRPTNDLLWLALAVRFSANSAVGLCIMCYSIRPISDRRVLDSSIAFSGVQSLSSSVQSTPEKNGHSDDASRSPELLQEFLKSGPKKELLQTCFSKDRKNLLSKRKMPETKSTSKIIKKQDNKKASSLSNQSCRKQHRKNKNPTRLSPVADQPADSGHSNSWICKNSACRAVLSIDDNFCRRCSCSICHLFDGNKDPTLWLVCSSESAEEDSCGSSCHIECALQHEKVGVVDLGQLMQLDGDYCCVSCGKVTGILGCWKKQLNIAKDARRVDVLCHRLYMSYKLLDGTSRFKELHEMVQQAKAILETEVGPVNGTSANMVRGIVSSLSNASDVQKLCSLAIEKAEGWLANVNPNSREGSLPAACKFVFEEITASSVKIILIDMSTTSSEDIKGYKLWHYKSREESVAKDPVCEFPKDQKRILLSNLQPCTEYTFRIISYTNNGELGFSEAKCFTKSVVVKKSPSLLVDLTHKIENPEIGGGSSASKAEPNPTVEDSGFKVRDLGKVLRLAWAQEQGHFDEFCCVDTENCCRETEMIKPKNSEEQLPAVSRGLDLNVVSVPDLNEELVPPESSRDENNGFTVQKAVKADDDAASRDAQKNDLAKSHGSGDSQTCINGPTREVPAVDSRTDASRKRVASTNEETHDCNSTLANGSPLGISDGTCSLDENYEYCVKVIRWLECEGHIKQEFRLKLLTWFSLRSTEQERRVVNTFIQTLLDDPSSLAGQLVDSFSDIISNKRPRNGLCSKLWH 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0161 750 MobiDBLite consensus disorder prediction 626 641 - -
Bisa01g0161 750 MobiDBLite consensus disorder prediction 604 618 - -
Bisa01g0161 750 MobiDBLite consensus disorder prediction 586 648 - -
Bisa01g0161 750 PANTHER VIN3-LIKE PROTEIN 2-RELATED 54 750 IPR044514 GO:0010048|GO:0040029
Bisa01g0161 750 MobiDBLite consensus disorder prediction 105 123 - -
Bisa01g0161 750 MobiDBLite consensus disorder prediction 105 160 - -
Bisa01g0161 750 Pfam PHD - plant homeodomain finger protein 165 283 IPR032881 -
Bisa01g0161 750 MobiDBLite consensus disorder prediction 588 603 - -
Bisa01g0161 750 SUPERFAMILY Fibronectin type III 369 455 IPR036116 GO:0005515
Bisa01g0161 750 MobiDBLite consensus disorder prediction 144 160 - -
Bisa01g0161 750 Gene3D Immunoglobulins 362 459 IPR013783 -
Bisa01g0161 750 ProSiteProfiles Fibronectin type-III domain profile. 361 460 IPR003961 GO:0005515
Bisa01g0161 750 Pfam Fibronectin type III domain 367 449 IPR003961 GO:0005515
Bisa01g0161 750 CDD FN3 366 455 IPR003961 GO:0005515
Bisa01g0161 750 MobiDBLite consensus disorder prediction 56 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0161 Bisa-ChrBisa01 2205888 2210121 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0161 161 744 PHD Gene Family AT3G24440 47.404 7.52e-175 513
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa01g0161 01 2205888 2210121 Bisa01g0161 01 2205888 2210121 ECH