Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0159 ATGATACGATATCCAAAGGACCAGTTAAAATACCTTATATGTAGGAGCGGGGTATGGGAGAGACACAGAACGGAAGCTTATGGTCAAATTTCATTGGGGAAGCCAAAAGTTGCACAAAGCCCAATGCATTTTATCAAGTGCAAAATGGGACGTGACATTAGGCTTTGCATTATTGGAGGCCAATGGGGTCGCAGGCGTTTCAAAACTATTGACTCAATGAATAATTGTTGTTCTACAAAAGGGGTTACTTATGTACAGATTGGTGCATGTGATAGATTAGGAACCTTTCAGTTCAATGGAAGCTGCAGAAGCAGGAGAAGAAGAAGAAGAGTGGGTTTTGAAAAAGAAGTGGAGATGGCAAATCGGTTGAAGGAAGATGAGAAAAATGAACGAATAATTCGAGGTCTTCTCAAACTTCCGGCGAATCGCAGATGTATTAATTGCAACAGCCTGGGACCACAATATGTGTGCACAAATTTCTGGTCCTTCGTTTGCACAAACTGCAGTGGAATTCACCGTGAATTTACACATCGAGTAAAATCAATTTCAATGGCTAAGTTTACTTCACAAGAAGTTAGTGCACTTCAGGAAGGAGGAAATCAGCATGCAAAAGAAATTTATTTTAAAGAATGGGACCCACAAAGTCATTCTCTCCCTGATAGCAGTAATGTTGACAGGCTCCGCAACTTCATTAAGCATGTTTATGTGGAGAGAAGATTCACTGGCAAGAGGACCTTTGACAAAACACTGAAAGTAAAGACAGGTGACAAGGACAATTTCTATGAAAACCGGAGAGTTGAACCATATCAGGGAGGTCCTAGGAGCCCACCATACGAGGATACATATGAACGTCGTTATAATGAAAGGTCTAGTCCAGGTGGAAGAAGCCCTGGATATGATCAAGAAAGTAGGCAGTACGGTGATGATAAGAGAAGTCCTGGTCACCCTCCGGTTATCACTGATTGGCGTCGTGAAGACAGATCTGGAGATGGAAGAAGATATGAAGATCAATCACCTGAGGCAGCCAAAGATCTGGGTTCTTCAAGTCCACCTGTGGTTCGGCCTGTTAGAGATATTTTGGGAGAAAATGCAGTACCTCTTCGAATAAGTGAACCCCCCAAAACAAATAGTAGAAAAGTTTCTGATCGCTCGGCACTCACACAGAGAACTGCATCTTCCAGTAGCTTGGCTTCCAGCAATGCAAACCCTGCAGAAGTTAAGCTTGAAACTATTAAGAGCCTTATTGATTTTGATGCTGAGCCAGAACCTCCAGTGGCACCAGCACTTCCTCAAGCCCAACAAACTACTGTAGCTCAATCCAGTGTGGAGCAACCAAATTCCATTGATGACAACAATTGGGCCTCTTTCGATGTGGCCCCAGAGGAAAAAGCAACTCAAGCTCCTTCAAATGTAAATCCACTTGAATCTGTTTTTTCCCAGTTGTCCATATCAGCATCTTTACCTTCTCATGTTTCTCAAGTCCAAGGTGGTTCCAGTATTGCAACACCTATTCCTGGGAGCAATGTGACAATACCAAAAACTGGGGACTCATATGTATCACCTGCTGGACCTGTGCCAGCATCATTTCTTAATGCTACTGCTGCTGGAGCTGCAACATTTAGCAGCATCTCAACTTTCCCATCCAGTGGTGCTTCAGTAGCTGGCCCTGGATTGACAACAGTATTGCAGCATCAGCAACCTTTATTTGCTCCTACTGTTGTTCAGTCTTCTGCTCAACAGTTTACACCATCAGGTGTTGGAGCTTTGAATAATCAGCAGTGGAATGTACCCCCTGCACCTGCATTGCAAGGCCATCCTAGCATGTCGATGCCAAATGCATCCCATCTAGTTTCAAAGCTTGCCAGTGAGATTAAATCCAGTGTTGTTTCACAACCATCTGTAGAAGTAAAACCAAGTGGAAGAAAAGAACTTCCTGAGGATCTCTTTACGGTAAAGTATTCATCCTTCCCTGCTTCAGTTCCAAGGTGGCAAATGGGTCCTCCTCACGGCATGGGTATCTCAATGCAATATAATACTGTGCCCATGCCAAGTTTCCAGCAGCCATCAAAATCAACAAATCCATTTGATATTGGCAGTGACCCACCTCCAATTCTAACCCCAACTTTTCCTTCAATATCATCCTTGCAAGATTCTTTGCCAAGTGTATCACCTTCTGGCCTGATGCGTCCTTCTAGCCTGGGTAATCCATCACTTGCGTGGAATCCACCCCTGTCATCACCATACGGATCAGTGCTGCCCCCACAAGCAGGACCTCATTTGTCAGTAATGGCAACAAGGCCTTACATGAGGCAACAAATGCCAACAAACATGCCAATGCCAAGGGATCAAGGAATTGGGAGTTTTGGCGCTGAGGGAGCTGCTCTTGGCATCTCAAATTTAGATCGGCAGATGACTGGTACGTTCTCAGTCTCTGCTACCTCAAATCCCTCTTCTGTTGGAGGGAACCCCTTTGGATGA 2478 0.4439 MIRYPKDQLKYLICRSGVWERHRTEAYGQISLGKPKVAQSPMHFIKCKMGRDIRLCIIGGQWGRRRFKTIDSMNNCCSTKGVTYVQIGACDRLGTFQFNGSCRSRRRRRRVGFEKEVEMANRLKEDEKNERIIRGLLKLPANRRCINCNSLGPQYVCTNFWSFVCTNCSGIHREFTHRVKSISMAKFTSQEVSALQEGGNQHAKEIYFKEWDPQSHSLPDSSNVDRLRNFIKHVYVERRFTGKRTFDKTLKVKTGDKDNFYENRRVEPYQGGPRSPPYEDTYERRYNERSSPGGRSPGYDQESRQYGDDKRSPGHPPVITDWRREDRSGDGRRYEDQSPEAAKDLGSSSPPVVRPVRDILGENAVPLRISEPPKTNSRKVSDRSALTQRTASSSSLASSNANPAEVKLETIKSLIDFDAEPEPPVAPALPQAQQTTVAQSSVEQPNSIDDNNWASFDVAPEEKATQAPSNVNPLESVFSQLSISASLPSHVSQVQGGSSIATPIPGSNVTIPKTGDSYVSPAGPVPASFLNATAAGAATFSSISTFPSSGASVAGPGLTTVLQHQQPLFAPTVVQSSAQQFTPSGVGALNNQQWNVPPAPALQGHPSMSMPNASHLVSKLASEIKSSVVSQPSVEVKPSGRKELPEDLFTVKYSSFPASVPRWQMGPPHGMGISMQYNTVPMPSFQQPSKSTNPFDIGSDPPPILTPTFPSISSLQDSLPSVSPSGLMRPSSLGNPSLAWNPPLSSPYGSVLPPQAGPHLSVMATRPYMRQQMPTNMPMPRDQGIGSFGAEGAALGISNLDRQMTGTFSVSATSNPSSVGGNPFG 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0159 825 Gene3D Arf GTPase activating protein 119 253 IPR038508 -
Bisa01g0159 825 SMART arf_gap_3 130 248 IPR001164 GO:0005096
Bisa01g0159 825 MobiDBLite consensus disorder prediction 302 340 - -
Bisa01g0159 825 CDD ArfGap_AGFG 130 240 - -
Bisa01g0159 825 PANTHER ARFGAP/RECO-RELATED 119 825 IPR044820 GO:0005096
Bisa01g0159 825 MobiDBLite consensus disorder prediction 709 730 - -
Bisa01g0159 825 SUPERFAMILY ArfGap/RecO-like zinc finger 129 241 IPR037278 -
Bisa01g0159 825 MobiDBLite consensus disorder prediction 429 453 - -
Bisa01g0159 825 MobiDBLite consensus disorder prediction 261 403 - -
Bisa01g0159 825 MobiDBLite consensus disorder prediction 708 730 - -
Bisa01g0159 825 FunFam Arf-GAP domain and FG repeat-containing protein 1 119 253 - -
Bisa01g0159 825 MobiDBLite consensus disorder prediction 419 453 - -
Bisa01g0159 825 MobiDBLite consensus disorder prediction 684 703 - -
Bisa01g0159 825 Coils Coil 110 130 - -
Bisa01g0159 825 Pfam Putative GTPase activating protein for Arf 131 242 IPR001164 GO:0005096
Bisa01g0159 825 MobiDBLite consensus disorder prediction 379 403 - -
Bisa01g0159 825 PRINTS HIV Rev interacting protein signature 179 200 IPR001164 GO:0005096
Bisa01g0159 825 PRINTS HIV Rev interacting protein signature 142 161 IPR001164 GO:0005096
Bisa01g0159 825 PRINTS HIV Rev interacting protein signature 161 178 IPR001164 GO:0005096
Bisa01g0159 825 ProSiteProfiles ARF GTPase-activating proteins domain profile. 130 248 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0159 Bisa-ChrBisa01 2162696 2176144 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0159 130 240 C2H2 Transcription Factor Family AT4G05330 35.043 3.77e-12 66.6