Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0157 ATGAGGAAGGTCTATTTTCCTCTTCTCATTCCCTTCTTCCTAGGCACACTATCCCTCACCGTCTCCTCTGACGCCTCCTTTACCAGCCATGGAGCTCTCACTGATGCTGAAGCCATGTACATCAGGCAACGTCAGCTCCTTTACTACAGGGACGAGTTCGGTGACAGAGGAGAAAATGTTACCGTCGATCCATCTCTGGTTTTCGAGAACAATCGCATCAGAAATGCTTACATAGCTTTACAAGCTTGGAAGCAAGCCATTCTTTCCGATCCGCAAAATCTCACTGCAAATTGGGTTGGACCCAATGTCTGTAACTACACTGGGGTTTATTGTGCTCCTGCGCTGGATAACCCTAAGGTTCGTACCGTCGCCGGCATTGATCTCAACCATGGTGACATTGCTGGGTATTTGCCGGAAGAGCTTGGACTACTCGTGGATCTTGCTCTCTTCCATATCAACTCCAACAGGTTCTGTGGTACTGTTCCTCACAAGTTCGATAGACTGAAACTGCTTTTTGAACTGGATCTCAGTAACAATAGGTTCGCCGGGAAGTTCCCGGAAGTGGTTCTGAGGCTTCCCACTCTCAAGTTCTTGGATCTGAGATACAATGAATTTGAAGGGACAGTGCCCAGAGAGCTCTTCGACAAGGATCTGGACGCGATCTTCATCAACCACAATCGTTTTGTGTTTGATATTCCAGACAATTTCGGGAACTCTCCGGTGTCGGTCATCGTTCTTGCGAACAACAAGTTCCATGGCTGCGTTCCGGCGAGCTTGGGCAACATGTCAAACCTGAACGAGATCATTCTGATGAACAATAACTTCCGTTCGTGCTTGCCTCCAGAGATTGGGATGCTGACGAACTTGACAGTGTTTGATGTGAGCTTCAATCAGCTCATGGGTCCCTTGCCAGACACCATTGGACGCATGGTGAGCCTTGAGCAGTTGAATGTAGCTCACAATATGCTTTCTGGGAAAATTCCAGCGAGCATTTGTATGCTACCTAATCTTCAGAACTTCACCTATTCGTATAACTTCTTCACTGGGGAGTCGCCGGCGTGCCTAAACTTGCCGTCGTTTGATGATCGGAGAAACTGCTTGCCCGCGAGGCCGCTACAGAGGTCAGCGGCACAATGTAAGTCGTTCTTGTCTCGGCCTGTGAATTGTAATTCGTTTAGATGTAAGCCTTTTACTCCGCGTCCTGCACCTCCACGTCCTACCCCTCCTACCCCTGTTCCCTCACCTCCACCGGTCGTCGTTCCATCACCACCTCCTCCATCCCCTGTTTATACTCCAATATCTCCTCCTCCTCCACCACCACCACCAGTTCAATCTCCACCTCCTCCTTCGCCCCCAGCACCAGTGTATTCCCCACCGCCTCCACCACCATCACCATCACCACCACCTCCTTCGCCGCCGCCTCCCCCACCAGTCTATTCTCCACCACCGCCTCCACCGTCACCACCTCCGCCAGTCTACTCTCCACCCCCACCTCCGCCTTCCCCTCCACCGCCAGTATATTCTCCACCGCCACCACCTTCACCTCCGCCACCTACTGAATCACCACCTCCACCATCGCCTCCTCCTCCATCTCCTCCACCACCTTCACCAACGCCACCATATTGCGTCCGGTCTCCACCGCCGCCGCCCCCCAATTCACCACCTCCACCTGCTCCCATATTCTTCCCACCCCCACCAACGACTTACTATTACAGCTCTCCGCCGCCGCCTCACCATTCGCCTCCACCGCCTCATCATTCGCCTCCGCCCCCTCCTCACTCACCGCCACCACCTGTTTATCCCTATTTGTCTCCGCCACCTCCTCCGGTCCATTCTCCTCCTCCCCCTGTCCATTCACCTCCACCACCATCTCCCCCACCTTGTATAGAACCACCTCCACCCCCTTCTCCACCACCTTGTGAAGAGCATTCTCCTCCACCACCAACTTCTCCCACACCCTATTTACCTCCTCCATCCCCATCTCCCCCTCCACCACCTGTATATGTCTCCTCACCACCGCCCCCTCCGGTTCACTACAGTGCACCCCCACCACCGGTTCACTACAGTTCACCCCCACCACCACCAGTTTACCATTCTCCTCCGCCGCCGCCGCCTCCATGCGAAACTCCGCCTGCACCTGTATATGAAGGGCCTTTGCCACCTGTCGTCGCAGTCCCGTACGCATCTCCACCTCCACCACCCTTCTATTGA 2211 0.5409 MRKVYFPLLIPFFLGTLSLTVSSDASFTSHGALTDAEAMYIRQRQLLYYRDEFGDRGENVTVDPSLVFENNRIRNAYIALQAWKQAILSDPQNLTANWVGPNVCNYTGVYCAPALDNPKVRTVAGIDLNHGDIAGYLPEELGLLVDLALFHINSNRFCGTVPHKFDRLKLLFELDLSNNRFAGKFPEVVLRLPTLKFLDLRYNEFEGTVPRELFDKDLDAIFINHNRFVFDIPDNFGNSPVSVIVLANNKFHGCVPASLGNMSNLNEIILMNNNFRSCLPPEIGMLTNLTVFDVSFNQLMGPLPDTIGRMVSLEQLNVAHNMLSGKIPASICMLPNLQNFTYSYNFFTGESPACLNLPSFDDRRNCLPARPLQRSAAQCKSFLSRPVNCNSFRCKPFTPRPAPPRPTPPTPVPSPPPVVVPSPPPPSPVYTPISPPPPPPPPVQSPPPPSPPAPVYSPPPPPPSPSPPPPSPPPPPPVYSPPPPPPSPPPPVYSPPPPPPSPPPPVYSPPPPPSPPPPTESPPPPSPPPPSPPPPSPTPPYCVRSPPPPPPNSPPPPAPIFFPPPPTTYYYSSPPPPHHSPPPPHHSPPPPPHSPPPPVYPYLSPPPPPVHSPPPPVHSPPPPSPPPCIEPPPPPSPPPCEEHSPPPPTSPTPYLPPPSPSPPPPPVYVSSPPPPPVHYSAPPPPVHYSSPPPPPVYHSPPPPPPPCETPPAPVYEGPLPPVVAVPYASPPPPPFY 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0157 736 Pfam Leucine rich repeat N-terminal domain 79 111 IPR013210 -
Bisa01g0157 736 SUPERFAMILY L domain-like 77 360 - -
Bisa01g0157 736 MobiDBLite consensus disorder prediction 690 723 - -
Bisa01g0157 736 Gene3D Ribonuclease Inhibitor 237 363 IPR032675 -
Bisa01g0157 736 Gene3D Ribonuclease Inhibitor 77 236 IPR032675 -
Bisa01g0157 736 MobiDBLite consensus disorder prediction 398 671 - -
Bisa01g0157 736 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 17 527 - -
Bisa01g0157 736 FunFam Leucine-rich repeat extensin-like protein 5 239 378 - -
Bisa01g0157 736 FunFam Leucine-rich repeat extensin-like protein 1 77 238 - -
Bisa01g0157 736 PRINTS Proline rich extensin signature 425 437 - -
Bisa01g0157 736 PRINTS Proline rich extensin signature 401 417 - -
Bisa01g0157 736 PRINTS Proline rich extensin signature 442 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0157 Bisa-ChrBisa01 2133176 2135386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0157 21 408 Leucine-rich Repeat extension Gene Families AT3G24480 74.293 0.0 638
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa01g0157 01 2133176 2135386 Bisa01g0157 01 2133176 2135386 ECH