Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0137 ATGGAGCAGAACGACTTAATCCCACCGTTCGTTATAAAGACTTATCAGATGGTCAACGATCCCGCCACGGATTCTCTCATCACTTGGAGCCGAGCTAACAATAGCTTCGTAGTCATAGACCCTCTCGATTTCTCCCAGAGGATCTTACCCGCCTATTTCAAGCACAACAACTTCTCTAGCTTCGTTCGTCAGTTAAATACCTATGGGTTCAGAAAGGTGGATCCAGATCGATGGGAGTTCGCGAACGAGTGGTTCCTTCGGGGGCAGGAGCAGTTGTTGAAGAATATCGTGAGGAGGAAGCAGAGTAGTAGGATTAGCTCTTCGATTTTTCAGGGGAAGCATGAGGAGTTGGAGGACGAAGCGTTGGTGACGGAGATAGCGAGGTTGAAGGAAGACCAGAAGTCGCTGGAGGAGGAGATTCAGGGGATGAATAAGAGATTGGAGACCACAGAGAAACGACCCCAGCAAATGATGGCGTTTCTGTCCAGAGTGGTAGAGGACCCAGATGTCCTATCACGTATTATGCTGGAGAAAGAGCGGAAGCAACTGGGGGCAAAGAAGCCGCGGTTGATATCGTCAGCGGCGGCGACGGCGACGGCGACGGCGACAACCTCGTCGTCGTCTTCATCCGGCATGGCGGTGAAATCGGAGTTCGAGGAAGAGGACGCTCCCGTGGGCCCTGTGATTCCTTCATCGCCAGAGATTGAGAATTTTTGTCAGACACCGCCGACAGAGGAGATGATCGGCGGCACCAATACGACGTCGGATTGGCATGCGATAACGGGAACGGGGAGGCCTCATATTACTCAACAGGCCTATCATTGGAACGCTGTTCCAAGGCCGTTGACCGCGGTTGTGGCGAATAGAATGGATAACAACTCGACGATGTCGGCGCGTGGGGGAGGGATGTATTCGGGGTGCGAAAATAGTAGAGGAGAAATGAGCTATGTCAAAGAAATAGCGGCGGAGCGAAGTCCGCCGCCGCCTTATCCATTTTCACTGTTGGAAGGCGGCTTCTAG 1020 0.5265 MEQNDLIPPFVIKTYQMVNDPATDSLITWSRANNSFVVIDPLDFSQRILPAYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEWFLRGQEQLLKNIVRRKQSSRISSSIFQGKHEELEDEALVTEIARLKEDQKSLEEEIQGMNKRLETTEKRPQQMMAFLSRVVEDPDVLSRIMLEKERKQLGAKKPRLISSAAATATATATTSSSSSSGMAVKSEFEEEDAPVGPVIPSSPEIENFCQTPPTEEMIGGTNTTSDWHAITGTGRPHITQQAYHWNAVPRPLTAVVANRMDNNSTMSARGGGMYSGCENSRGEMSYVKEIAAERSPPPPYPFSLLEGGF 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0137 339 MobiDBLite consensus disorder prediction 197 214 - -
Bisa01g0137 339 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 7 217 IPR027725 -
Bisa01g0137 339 PRINTS Heat shock factor (HSF) domain signature 10 33 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa01g0137 339 PRINTS Heat shock factor (HSF) domain signature 48 60 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa01g0137 339 PRINTS Heat shock factor (HSF) domain signature 61 73 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa01g0137 339 SMART hsfneu3 6 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa01g0137 339 Coils Coil 119 153 - -
Bisa01g0137 339 Pfam HSF-type DNA-binding 10 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa01g0137 339 FunFam Heat shock transcription factor 1 3 100 - -
Bisa01g0137 339 Gene3D - 2 100 IPR036388 -
Bisa01g0137 339 MobiDBLite consensus disorder prediction 197 234 - -
Bisa01g0137 339 ProSitePatterns HSF-type DNA-binding domain signature. 49 73 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa01g0137 339 SUPERFAMILY "Winged helix" DNA-binding domain 7 99 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0137 Bisa-ChrBisa01 1875339 1876499 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0137 6 198 HSF AT3G24520 64.975 3.06e-87 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Bisa01g0137 HSF_DNA-bind 2.1e-31 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa01g0137 01 1875339 1876499 Bisa01g0137 01 1875339 1876499 ECH