Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0129 ATGTCCACGACGCCGTCTCCCGGAGGTTCTCCGGCGCCCACATCGCCGCCGGCGACTAAAACCACCTCTCCTCCTCCGTCGACCCCCTCTGCTCCCCCGCCATCCACTCCGGCTGCGCCACCGCCAGCCACTCCGGCTACGCCACCTCCGGCCACTCCTTCTGCACCACCACCGGCGACTCCTTCGCCTCCAACCCCCACCACTCCAGCTGCGAGTCCTCCTTCTCCTTCGCCTCCAACCCCTACCACTCCAGCTGCGAGTCCTCCTTCTCCTTCGCCTCCTTCGCCGTCTCCGCCACCTAGTACCAACACTCCGCCGAGTCCGGCTTCTCGGAGCTCGCCGCCGCCTCCGTCGAGCTCAGGCACGCCATCTACTCCAAACCGAAGCCCACCGCCCCCTTCGTCAAAATCGTCGCCGCCGCCGCCGTCTTCGTCGTCGTCGTCGAGTAATATATCGACTGGTGTTGTTGTTGGAATCGCCGTTGGGGCTGTGGCGATTCTTCTGGTGTTGAGTATTCTGTGCATATGTTGTAGAAAGAAGAGAAGGAGACGCGAAGAGGAGTACTATGTGCCGCCACCTCCGCCTCAGGGACCCAAAGTTGATCCATATGGTGGCCCAGCACGTCAGTGGCAACACAACGTCCCCCCTCCCCCAGATCATGTTGTCTCGGTGATGCCAAAGCCATCACCGCCTCCGCCAGTTGCATCACGACCACTGCAATCACCAGTTTATGCTCCTCAACCTCCGCCACCACCACCTCCTTTTGTGAGCAGCAGCGGTGGATCTGGCTCCAACTATTCGGGTAGTGAAAACCCACTTCCGCCTCCTTCTCCAGGCTTTGCATTGGGCTTCTCGAAGAGCACATTTACTTATGAGGAGTTGGCACGGGCAACAGATGGCTTCTCTGATGCCAACCTCCTTGGACAAGGTGGATTTGGGTATGTGCACCGAGGCATTCTTCCCAATGGGAAGGAGGTAGCTGTCAAGCAGCTGAAGGCTGGAAGCGGGCAGGGTGAGCGTGAATTTCAAGCTGAGGTTGAGATCATTAGCCGAGTTCATCACAAACATCTTGTTTCTCTGGTTGGATACTGCATCACTGGGACACAGAGGTTGCTTGTTTATGAATTTGTGCCCAACAATACATTGGAGTTCCACTTGCATGGAAAAGGGCGACCTACCATGGACTGGCCAACAAGACTGAAAATTTCTCTAGGGTCTGCGAAAGGACTGGCGTATCTTCACGAGGATTGTCATCCTAAGATAATCCATCGAGATATCAAATCTGCTAACATACTTCTGGATTTTAAGTTTGAAGCAAAGGTTGCAGATTTTGGGCTTGCGAAGTTTTCTTCTGACGTTAATACTCATGTTTCCACTCGAGTGATGGGGACCTTCGGTTATCTGGCCCCGGAATATGCTTCTAGTGGAAAACTCACAGAAAAATCAGATGTTTTCTCCTTCGGAGTCATGCTTCTGGAATTAATTACTGGGCGTCGACCCGTTGATTCAAATCATACTTTCATGGAGGATAGTTTGGTAGACTGGGCGAGGCCTGTGCTCACACGCGCATTGGAAGATGAAAACTTCGACTCTCTGGTTGATCAAAGACTCCAACATGAATATGACCCCAATGAGATGGCTCGCATGGTGGCATGTGCTGCAGCTTGCATACGACACTCAGCACGACGTAGACCGAGGATGAGCCAGGTTGTTCGTGCTCTGGAAGGAGATGTGTCTCTAGCCGATCTCAACGAGGGCATAAGACCTGGACACAGCACTGTCTACAGTTCTCATGGAAGCTCAGATTATGACACATCACAATACAAGGAGGACATGAGAAAGTTCAGAAAAATGGCATTCGGAGGGGGAACACAGGAGTACGGCGCCAGCAGTGAATACAGTGGACCGCCTACGAGTGAGTACGGTTTATACCCATCTGGCTCAAGCAGTGAAGGCCCTAGCCGCCAAACCACGCGGGAAATGGAAATGAGAAAGATGAAGAACAACCAAGGTTTCAGTGGAAGTTCTTAA 2031 0.5342 MSTTPSPGGSPAPTSPPATKTTSPPPSTPSAPPPSTPAAPPPATPATPPPATPSAPPPATPSPPTPTTPAASPPSPSPPTPTTPAASPPSPSPPSPSPPPSTNTPPSPASRSSPPPPSSSGTPSTPNRSPPPPSSKSSPPPPSSSSSSSNISTGVVVGIAVGAVAILLVLSILCICCRKKRRRREEEYYVPPPPPQGPKVDPYGGPARQWQHNVPPPPDHVVSVMPKPSPPPPVASRPLQSPVYAPQPPPPPPPFVSSSGGSGSNYSGSENPLPPPSPGFALGFSKSTFTYEELARATDGFSDANLLGQGGFGYVHRGILPNGKEVAVKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYCITGTQRLLVYEFVPNNTLEFHLHGKGRPTMDWPTRLKISLGSAKGLAYLHEDCHPKIIHRDIKSANILLDFKFEAKVADFGLAKFSSDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSNHTFMEDSLVDWARPVLTRALEDENFDSLVDQRLQHEYDPNEMARMVACAAACIRHSARRRPRMSQVVRALEGDVSLADLNEGIRPGHSTVYSSHGSSDYDTSQYKEDMRKFRKMAFGGGTQEYGASSEYSGPPTSEYGLYPSGSSSEGPSRQTTREMEMRKMKNNQGFSGSS 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0129 676 Gene3D Transferase(Phosphotransferase) domain 1 377 584 - -
Bisa01g0129 676 MobiDBLite consensus disorder prediction 9 140 - -
Bisa01g0129 676 SMART serkin_6 301 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g0129 676 MobiDBLite consensus disorder prediction 1 151 - -
Bisa01g0129 676 ProSitePatterns Protein kinases ATP-binding region signature. 307 329 IPR017441 GO:0005524
Bisa01g0129 676 MobiDBLite consensus disorder prediction 184 279 - -
Bisa01g0129 676 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 162 634 IPR047117 -
Bisa01g0129 676 ProSitePatterns Serine/Threonine protein kinases active-site signature. 421 433 IPR008271 GO:0004672|GO:0006468
Bisa01g0129 676 Pfam Protein tyrosine and serine/threonine kinase 306 574 IPR001245 GO:0004672|GO:0006468
Bisa01g0129 676 CDD STKc_IRAK 307 576 - -
Bisa01g0129 676 PRINTS Proline rich extensin signature 3 15 - -
Bisa01g0129 676 PRINTS Proline rich extensin signature 58 79 - -
Bisa01g0129 676 PRINTS Proline rich extensin signature 17 33 - -
Bisa01g0129 676 PRINTS Proline rich extensin signature 46 58 - -
Bisa01g0129 676 MobiDBLite consensus disorder prediction 627 656 - -
Bisa01g0129 676 SUPERFAMILY Protein kinase-like (PK-like) 276 574 IPR011009 -
Bisa01g0129 676 MobiDBLite consensus disorder prediction 627 676 - -
Bisa01g0129 676 MobiDBLite consensus disorder prediction 219 257 - -
Bisa01g0129 676 FunFam proline-rich receptor-like protein kinase PERK1 279 376 - -
Bisa01g0129 676 FunFam Proline-rich receptor-like protein kinase PERK1 377 585 - -
Bisa01g0129 676 Gene3D Phosphorylase Kinase; domain 1 281 376 - -
Bisa01g0129 676 ProSiteProfiles Protein kinase domain profile. 301 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0129 Bisa-ChrBisa01 1766625 1770727 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0129 109 659 Trihelix Transcription Factor Family AT1G70460 49.550 5.99e-173 509
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Bisa01g0129 PK_Tyr_Ser-Thr 2.4e-47 CL0016