Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0128 ATGCCATCCCTATCCGTCACTGCCCTCTCTCCATTGCCATCGTTTCAAAACCCTAACTTGGACCATACCCACTTCTTCAAACCCCCTAAATTCTTCAATCTCCATCCATGTTCCAAAACCCTAACTAACAGATTTTGCTATAGAATCGAAAACTGTAGAATCCACTACCGGAGGATTAATTGCAATGCTCTTAAGGATTCCGGAGAAGAAACTAAGGTGGTCTTAGACTCCGGTGATGGCGATGGCGATGGCGGGGGAGGAGGTGGCGGTAACGGTGGCGAGGGTGGCGGGGATAGGGAGGTGGAGAAAAAAGTTGGGCCTTCGGGGCCTTTGACGGATTGGCTGAATTTTACGTCTGATGACGCGAAGACGGTCTTTGCGGCACTAGCAATCTCGCTTGCGTTTCGGTCGTTTGTGGCCGAGCCGAGGTACATTCCTTCGTTGTCAATGTATCCTACATTTGATGTTGGAGATCGAATTGTTGCAGAAAAGGTTTCATACTATTTTAGAAAGCCATGTGAAAATGATATAGTGATATTTAAAAGTCCACCAGCCCTCCAAGAAGTTGGGTATACCGATGATGATGTTTTCATAAAACGAGTGGTTGCAAAGGAAGGTGATATTGTGGAGGTTCGCAAAGGGCATCTTATAGTTAATGGGGTTGAAAGGGATGAGAAGTTCATCCTTCAACCACCTTCTTATGACATGACTCCTATACGTGTACCAAAGAACTATGTTTTTGTGATGGGAGACAACCGCAACAACAGCTACGATTCGCATGTGTGGGGCCCTTTGCCAGCCAAGAATATCATAGGGAGATCAGTACTTCGCTACTGGCCTCCAAATAGGGTTGGTAGCACAGTTTCTGAGGAGCGATGTCCTGTTGAAAGCGAGCAAGGGACTAGTCTAGCATCTCAGTGA 921 0.4669 MPSLSVTALSPLPSFQNPNLDHTHFFKPPKFFNLHPCSKTLTNRFCYRIENCRIHYRRINCNALKDSGEETKVVLDSGDGDGDGGGGGGGNGGEGGGDREVEKKVGPSGPLTDWLNFTSDDAKTVFAALAISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVSYYFRKPCENDIVIFKSPPALQEVGYTDDDVFIKRVVAKEGDIVEVRKGHLIVNGVERDEKFILQPPSYDMTPIRVPKNYVFVMGDNRNNSYDSHVWGPLPAKNIIGRSVLRYWPPNRVGSTVSEERCPVESEQGTSLASQ 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0128 306 PRINTS Bacterial leader peptidase 1 (S26A) family signature 138 154 IPR000223 GO:0006508|GO:0008236|GO:0016020
Bisa01g0128 306 PRINTS Bacterial leader peptidase 1 (S26A) family signature 241 260 IPR000223 GO:0006508|GO:0008236|GO:0016020
Bisa01g0128 306 PRINTS Bacterial leader peptidase 1 (S26A) family signature 197 209 IPR000223 GO:0006508|GO:0008236|GO:0016020
Bisa01g0128 306 Gene3D Umud Fragment, subunit A 135 293 - -
Bisa01g0128 306 FunFam Peptidase/ serine-type peptidase 147 278 - -
Bisa01g0128 306 ProSitePatterns Signal peptidases I serine active site. 147 154 IPR019756 GO:0004252|GO:0016020
Bisa01g0128 306 MobiDBLite consensus disorder prediction 285 306 - -
Bisa01g0128 306 PANTHER SIGNAL PEPTIDASE I 111 285 IPR000223 GO:0006508|GO:0008236|GO:0016020
Bisa01g0128 306 ProSitePatterns Signal peptidases I signature 3. 246 259 IPR019758 GO:0004252|GO:0016020
Bisa01g0128 306 Pfam Signal peptidase, peptidase S26 122 279 IPR019533 GO:0004252|GO:0006465
Bisa01g0128 306 MobiDBLite consensus disorder prediction 292 306 - -
Bisa01g0128 306 MobiDBLite consensus disorder prediction 73 107 - -
Bisa01g0128 306 NCBIfam signal peptidase I 123 281 IPR000223 GO:0006508|GO:0008236|GO:0016020
Bisa01g0128 306 SUPERFAMILY LexA/Signal peptidase 136 287 IPR036286 -
Bisa01g0128 306 CDD S26_SPase_I 141 273 IPR019533 GO:0004252|GO:0006465
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0128 Bisa-ChrBisa01 1760044 1763336 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0128 150 280 MADS-box Gene Family AT1G29960 33.333 7.56e-13 62.8