Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0118 ATGGGGGAAGGTGAGGGGGGTGATTGCCCTCCGAAGAATGTAACATCGGATGTTACAGCAGCAGCGTTGCCGTCGGATGTTCCGGCGAAGAAGCTAGCGAGGCAGCTCGATTTCACGGGTTACAGTGGTACGGCCTTGCCCGAACACCCGCAATCTCAGCTGCAGCCTCAGTCGCAGACGGTGGCCCAGAGTCAGCCGCAGCCACGCCCACTTACACAGCAACCGGTTGTTGTGATACCGGTGCCATCGCAGGCCCCTCATTCTTCAGCGAGAGTCGGGAAGCCGGAGTCTCCAAAATCAAGATCAAGACCCAACTTTGAAATGAAAGAGGTCACTCCAAAGAAGCAAAAACAGTGCAATTGTAAACACTCAAAGTGCTTAAAGCTATATTGTGAATGCTTTGCATCAGGAATATATTGTGATGGGTGCAACTGTGTAAATTGCTATAACAATGTTGAAAATGATGCTGCTAGACGAGAAGCTGTTGAAGCTACGTTAGAGCGCAATCCAAATGCATTTAGGCCAAAAATTGCAAGCAGCCCTCATGGAGCACGTGATAGCAGGGAGGAAGCTGGTGAAGTTTTAATAGTTGGAAAGCACAACAAGGGGTGCCATTGCAAAAAATCTGGATGCCTTAAGAAGTACTGTGAGTGCTTCCAAGCCAACATACTTTGCTCTGAAAACTGTAAATGCATGGACTGCAAAAATTTTGAGGGAAGTGAAGAGAGACAAGCTTTGTTCCATGGAGATCAAAATAATAACATTGCATTTATTCAGCAAGCAGCTAATGCTGCCATAACTGGAGCAATTGGATCCTCTGGTTATTCATCCCCTCCAGTGTCCAAGAAAAGAAAAGGCCAGGAACTCTTCTTTGGGCAAATAACCAAGGACCCATCCAGTGGCAGGCTTGGGCAATTTCAACAGGCAAACCATATCAGAGGTCCTGCACCTTCATCGTCCTTGTCTCCCATCCCTGGTGCTCGTGTTGGAGGTGCAACATTAGGCCCTTCAAAATTCACATACAGGTCTCTTTTGGCAGACATCATACAACCACAGCACTTGAAGGAGCTTTGCTCAGTTCTAGTGTTAGTATCAGGACAAGCTGCAAAGACACTTACAGACCAGAAGACTCTGATGGAAAAGAATGCAGAAGATCAGGTGGAAACTTCCGTAGCTTCTTCAACTCAAGAACAATTGCCAAGTCAAAAGGAAGTAGATGTTGAGAAAGCTATGGCTGATGATTGTTCAAGTGCAAACCAAACAGATAAAATCAGCCCAGATAATTCAAGTTCAGATGGTGCTGATGTCCCAAAAGCGAGGCCAGTGTCTCCTGGAACTTTAGCCTTGATGTGTGATGAGCAAGATACGATGTTCATGACAGCTGCCTCCCCTAATGGGTCAATGGCCCATGCCTGCAACACATCTTCACAGACTCCTTATGGACAAGGCATGACAGAGGTTTATGCAGAGCAAGAAAGAATCGTATTGACAACGTTTAGAGATTTTCTTAATCGGGTTATCACAATGGGAGAAATAAACGAAACAAAGTGTTCTTCATTAGCCAGAAGTGAATTAGAGAATCAGAAAGACCTAATCAACAATGGCAGTGGAAATACTGGTATGGAAACAGCACAACAGCAGGGAGCCGCTAGTAATGGTGTCGTCAATGCTACTGTACCACCTATGATCACTAGTATGAACATGATTACTAGTTCAGAGGCTCCCGGTAATCTTGTCCCTGAAAGTGGGGAAAGTAAAAAGGAGATATGA 1770 0.4565 MGEGEGGDCPPKNVTSDVTAAALPSDVPAKKLARQLDFTGYSGTALPEHPQSQLQPQSQTVAQSQPQPRPLTQQPVVVIPVPSQAPHSSARVGKPESPKSRSRPNFEMKEVTPKKQKQCNCKHSKCLKLYCECFASGIYCDGCNCVNCYNNVENDAARREAVEATLERNPNAFRPKIASSPHGARDSREEAGEVLIVGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDQNNNIAFIQQAANAAITGAIGSSGYSSPPVSKKRKGQELFFGQITKDPSSGRLGQFQQANHIRGPAPSSSLSPIPGARVGGATLGPSKFTYRSLLADIIQPQHLKELCSVLVLVSGQAAKTLTDQKTLMEKNAEDQVETSVASSTQEQLPSQKEVDVEKAMADDCSSANQTDKISPDNSSSDGADVPKARPVSPGTLALMCDEQDTMFMTAASPNGSMAHACNTSSQTPYGQGMTEVYAEQERIVLTTFRDFLNRVITMGEINETKCSSLARSELENQKDLINNGSGNTGMETAQQQGAASNGVVNATVPPMITSMNMITSSEAPGNLVPESGESKKEI 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0118 589 MobiDBLite consensus disorder prediction 414 432 - -
Bisa01g0118 589 MobiDBLite consensus disorder prediction 384 401 - -
Bisa01g0118 589 ProSiteProfiles CRC domain profile. 115 239 IPR005172 -
Bisa01g0118 589 SMART CXC_2 199 240 IPR033467 -
Bisa01g0118 589 SMART CXC_2 114 154 IPR033467 -
Bisa01g0118 589 MobiDBLite consensus disorder prediction 40 70 - -
Bisa01g0118 589 PANTHER TESMIN/TSO1-RELATED 47 512 IPR028307 -
Bisa01g0118 589 MobiDBLite consensus disorder prediction 570 589 - -
Bisa01g0118 589 MobiDBLite consensus disorder prediction 83 109 - -
Bisa01g0118 589 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 202 236 IPR005172 -
Bisa01g0118 589 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 116 151 IPR005172 -
Bisa01g0118 589 MobiDBLite consensus disorder prediction 45 70 - -
Bisa01g0118 589 MobiDBLite consensus disorder prediction 381 441 - -
Bisa01g0118 589 MobiDBLite consensus disorder prediction 533 552 - -
Bisa01g0118 589 MobiDBLite consensus disorder prediction 94 109 - -
Bisa01g0118 589 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0118 Bisa-ChrBisa01 1645723 1654463 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0118 1 526 CPP Transcription Factor Family AT4G29000 57.092 0.0 585
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Bisa01g0118 TCR 3.1e-12 No_clan