Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0104 ATGTCTGTGCCATTAGAGCACGACTATGTGAGCTTATCAGAGGTTCCAAATCCATCAATGGAAAGCGCAGACAAGTTTTCTCAGAGAAGCACCGGCTTGAACTTGAAGGCCACTGAGCTACGGCTCGGGTTACCAGGGTCGGAGTCACCCGAGAGGGACTCGGGTTCGGACGACAAGAATGGGTACCCGTTAAGCATGCTGAAGAGTCTCGTGTCCGGGGCCAAGAGGGGTTTCTCGGACGCCATTGACGGTGGGTCTGGGAAGTGGGTTCTCTCAGGTAAAGATGGATCTGAAATGGGTTTGGTTCAAGATTGTGGCTTGTTCTCTCCCAGAGGCGTCAACTCCGGCAAGACTCTTGTCGGGTCGGACTCCACCAACCAACAAACGGGTTTGGGCTCGTCCGTTCTGAAGGATAGTATTCCGCAGTCGACAAAGCCTTTGCATGAGAAGAAGCCCCAGCTTGTTGCTCCCGCTTCAAAGGCACAAGTAGTGGGATGGCCACCAATCCGATCGTTCAGGAAGAACTCAATGGCGTCTCAGCCTCAGAAGAATGGAGATGATGCAGAAGCAGCCAAAGGTGGATGCCTTTATGTAAAAGTGAGCATGGATGGTGCCCCATACTTGAGGAAAGTTGATCTCAAAAACTTTGCCTCTTACATGGAACTTTCTTCAGCTCTGGAAAAGATGTTCAGTGGGTTTACAATCAGTCAATGCGGCTCCCATGGAGTTTCTGGTCGAGATAACATGAGTGAAAAAAGATTGATGGATCTCCTTCATGGCTCAGAATATGTGCTCACCTATGAGGACAAGGATGGGGATTGGATGCTAGTTGGTGATGTTCCCTGGGAGATGTTCACTGACTCTTGCAAAAGGCTCAGGATAATGAAGAGTTCTGAAGCAATTGGGCTAGCACCAAGAGCAATGGAGAAGTGCAAAAGTCGGAACTAG 948 0.4979 MSVPLEHDYVSLSEVPNPSMESADKFSQRSTGLNLKATELRLGLPGSESPERDSGSDDKNGYPLSMLKSLVSGAKRGFSDAIDGGSGKWVLSGKDGSEMGLVQDCGLFSPRGVNSGKTLVGSDSTNQQTGLGSSVLKDSIPQSTKPLHEKKPQLVAPASKAQVVGWPPIRSFRKNSMASQPQKNGDDAEAAKGGCLYVKVSMDGAPYLRKVDLKNFASYMELSSALEKMFSGFTISQCGSHGVSGRDNMSEKRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDSCKRLRIMKSSEAIGLAPRAMEKCKSRN 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0104 315 MobiDBLite consensus disorder prediction 15 35 - -
Bisa01g0104 315 Gene3D - 189 308 - -
Bisa01g0104 315 MobiDBLite consensus disorder prediction 119 141 - -
Bisa01g0104 315 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 33 302 IPR003311 GO:0005634|GO:0006355
Bisa01g0104 315 ProSiteProfiles PB1 domain profile. 195 297 IPR000270 GO:0005515
Bisa01g0104 315 SUPERFAMILY CAD & PB1 domains 193 296 - -
Bisa01g0104 315 MobiDBLite consensus disorder prediction 119 159 - -
Bisa01g0104 315 Pfam AUX/IAA family 38 306 IPR033389 -
Bisa01g0104 315 FunFam Auxin-responsive protein 190 307 - -
Bisa01g0104 315 MobiDBLite consensus disorder prediction 1 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0104 Bisa-ChrBisa01 1478308 1480502 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0104 198 305 B3 DNA Binding Superfamily AT4G23980 30.556 3.92e-08 52.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Bisa01g0104 AUX_IAA 6.3e-89 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa01g0104 01 1478308 1480502 Bisa01g0104 01 1478308 1480502 ECH