Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0097 ATGGAACGGATCGTCGGCAGCAAGTACAAGCTCGGCCGCAAGATCGGGAGCGGATCCTTCGGCGAAATCTACCTCGCTACTCATATCGATACGTTCGAGATAGTTGCTGTTAAGATCGAGAATAATAAAACAAAGCATCCACAACTGCTTTATGAGGCAAAACTGTACAACATTCTTCAAGGAGGAAGTGGAATTCCTAGCATAAGATGGTCAGGTGTAGACGGGGAGGACAATGTGCTAGTTCTTGATTTGCTGGGACCGAGTCTTGAGGATCTGTTTGTGTATTGTGGAAGGAAGTTTTCATTAAAAACAGTATTAATGTTGGCTGATCAAATGATCACTAGGATAGAATATGTGCATTCCAAGGGCTTTTTACATAGAGATATAAAACCTGATAACTTTCTCATGGGACTTGGTCGGAAGGCTAACCAGGTTTACATAATTGATTTTGGGCTTGCAAAAAGATATCGGGACTCTACAACTAATCGCCACATTCCTTACAGGGAGAACAAAAACTTGACAGGCACTGCACGTTATGCAAGTTGTAATACTCACCTTGGGATTGAGCAAAGTCGACGGGATGATTTGGAGTCGCTAGGATATGTACTTTTGTACTTCCTAAGAGGGAGCCTTCCTTGGCAAGGTCTAAAGGCTGCAACGAAGAAGCAAAAGTATGATAAGATATGTGAGAAGAAAGTATCAACTCCTATTGAGGTCCTATGCAAATCTCATCCTGTAGAGTTTGCTTCGTACTTTCATTACTGCCATTCTCTGACATTTGATCAGCGACCTGATTATGGATTTTTGAAGCGCTTATTCCGTGACTTGTTTGCTCGAGAAGGTTTTGAATTTGATTATGTATTTGATTGGACCATTTTAAAGTACCAGCAGGCACAAAAGAATAGAGTTCAGCCTCGCTTATCTCCAATTCCTGGAGCAAGCAGTAGTCATGCATTGCCAATGGGTGTTGACAATCGTCAAGGTTTTAATGCTTATTCAGGGGATGACCCAGAGCGCATTAGATCTGGCAATGCTACTGTAATCCTCTTGACAAGAATATTTTTGAAGAATCAAATATGCCCTCTACTTCCTATTCACCTGCTGGAAACTCAAAACGGAACTCCTTGA 1128 0.4184 MERIVGSKYKLGRKIGSGSFGEIYLATHIDTFEIVAVKIENNKTKHPQLLYEAKLYNILQGGSGIPSIRWSGVDGEDNVLVLDLLGPSLEDLFVYCGRKFSLKTVLMLADQMITRIEYVHSKGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKRYRDSTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPVEFASYFHYCHSLTFDQRPDYGFLKRLFRDLFAREGFEFDYVFDWTILKYQQAQKNRVQPRLSPIPGASSSHALPMGVDNRQGFNAYSGDDPERIRSGNATVILLTRIFLKNQICPLLPIHLLETQNGTP 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0097 375 SMART serkin_6 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g0097 375 CDD STKc_CK1_delta_epsilon 8 282 - -
Bisa01g0097 375 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Bisa01g0097 375 FunFam Casein kinase I isoform delta-like 1 338 - -
Bisa01g0097 375 PANTHER CASEIN KINASE-RELATED 8 301 - -
Bisa01g0097 375 Gene3D Transferase(Phosphotransferase) domain 1 1 315 - -
Bisa01g0097 375 ProSiteProfiles Protein kinase domain profile. 9 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g0097 375 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Bisa01g0097 375 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Bisa01g0097 375 Pfam Protein kinase domain 9 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0097 Bisa-ChrBisa01 1410990 1414755 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0097 9 215 EF-hand Containing Proteins AT4G23650 29.108 2.98e-14 72.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Bisa01g0097 Pkinase 6.1e-28 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa01g0097 01 1410990 1414755 Bisa01g0097 01 1410990 1414755 ECH