Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0086 ATGGCTGAGCCTCCACGCTCACACACTGACACTGCCACCAACTGCTCTTCTTCGCCTTCGCCTTCCCCTTCATCCTCCTCTCCTTTACCAAACGCTACTTCCTCTGAAGAAGTTTCCACCACTCCACAACAGAGGAAGCTCAAGCGAGCTAGGGATTGTAGCAGCAACACCAACCACCCTGTTTACAGAGGAGTCCGAATGCGAACCTGGGGCAAATGGGTCTCCGAAATCCGCGAACCCAGAAAGAAAAATCGGATCTGGCTCGGCACCTTCGCCACCCCTGAAATGGCCGCGCGTGCTCACGACGTCGCCGCCCTCGCCATTAAAGGCAACTCCGCCATCCTCAACTTCCCCGACCTCGCCGCTTCCCTCCCCCGACCTCCTTCCAAATCGCCCAGAGATGTTCAAGCTGCCGCCGCTAAAGCCGCTTCGATGCAGATTTTCAACGTTAACCCCAAAACGTCGTCGTCGTCTTCCTCCTCCTCCTCCTCCTCCTCGTCTTCGTCTTCTTCCTCATTGGTAGTGTCCTGTTCCTCCGGCGACGCTTCGAGCTCAACACCGGAGGAACTGGGGGAGATAGTGGAGCTTCCGTCGCTGGGTACCAGTTTCGAAGGACCCGACCCGAGTAGCGAGTTCGTGTATTTCGACCCGGTAGATGGAGGGTGGCTCTATCCTCACCCGTGGTATCATCAAACGCTTTATGATGACAAGGACTGTGGTGGGTATTTCATTGGGGATCACATCTCAATGCAACACGACGCCGAGAGTATGATTATTTGTGGCTTTGAGGCCTCATTGTGGCAACATTAA 810 0.5519 MAEPPRSHTDTATNCSSSPSPSPSSSSPLPNATSSEEVSTTPQQRKLKRARDCSSNTNHPVYRGVRMRTWGKWVSEIREPRKKNRIWLGTFATPEMAARAHDVAALAIKGNSAILNFPDLAASLPRPPSKSPRDVQAAAAKAASMQIFNVNPKTSSSSSSSSSSSSSSSSSSLVVSCSSGDASSSTPEELGEIVELPSLGTSFEGPDPSSEFVYFDPVDGGWLYPHPWYHQTLYDDKDCGGYFIGDHISMQHDAESMIICGFEASLWQH 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0086 269 SUPERFAMILY DNA-binding domain 61 119 IPR016177 GO:0003677
Bisa01g0086 269 Pfam AP2 domain 60 110 IPR001471 GO:0003700|GO:0006355
Bisa01g0086 269 FunFam Ethylene-responsive transcription factor 2 60 119 - -
Bisa01g0086 269 CDD AP2 62 120 IPR001471 GO:0003700|GO:0006355
Bisa01g0086 269 PRINTS Ethylene responsive element binding protein signature 62 73 IPR001471 GO:0003700|GO:0006355
Bisa01g0086 269 PRINTS Ethylene responsive element binding protein signature 84 100 IPR001471 GO:0003700|GO:0006355
Bisa01g0086 269 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 32 202 - -
Bisa01g0086 269 MobiDBLite consensus disorder prediction 151 170 - -
Bisa01g0086 269 Gene3D AP2/ERF domain 61 119 IPR036955 GO:0003700|GO:0006355
Bisa01g0086 269 ProSiteProfiles AP2/ERF domain profile. 61 118 IPR001471 GO:0003700|GO:0006355
Bisa01g0086 269 SMART rav1_2 61 124 IPR001471 GO:0003700|GO:0006355
Bisa01g0086 269 MobiDBLite consensus disorder prediction 1 60 - -
Bisa01g0086 269 MobiDBLite consensus disorder prediction 7 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0086 Bisa-ChrBisa01 1340897 1341706 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0086 29 228 AP2-EREBP Transcription Factor Family AT5G11590 57.561 2.01e-62 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa01g0086 AP2 5.7e-14 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa01g0086 01 1340897 1341706 Bisa01g0086 01 1340897 1341706 ECH