Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0065 ATGACAGATTATCCTAATGCTGTATGTTGCTTAAATAAAATTGCTTCTTCAATGTGGTTTGTGGTCTTTGGATTGATAGCATATAGTATGATTATGATATTATATATCTTTGATAAAGTATGGCCTTGTGGCGTCTCCAGTGGAATGGAGTTCTTCATGAACTCCATCAATGATGTGGACGTGAGTTCACACACCCAGATGACAAAATCAACTCCATTCTCGTGTCTCCAAATCCCATCTTACTCCCTTTTCTTCTTCTTCTTCCTCTTCCTGAGCCATGCTAACTCTCAGTCTGAACTGTATGATCAAGAACATGCAGTGTTGCTGAGGATAAAGCGATACCTGCAAAACCCATCTTTTCTCAGTCACTGGACCTCGTCGAATTCTTCCCATTGTTCTTGGCCAGAGATCAACTGCACCAACGACTCTGTCACAAAACTGGCTCTTATAAACACCAACATCACCCAGACAATACCGCCTTTCCTCTGTGAACTCAAAAACCTCACGATCATTGATTTTCAATGGAATTACTTTCCCGGGGAATTCCCCATTTTTCTCTACAACTGCTCCAAGCTGGAGTACCTGGACCTCTCGAATAATTACTTTGTTGGTAAGATACCAGATGACATTGACCGACTGGCTAACCTGAGTTTTCTCAACCTTGGAGGCAACAACTTTTCCGGTGATATTCCGGCGAGCATTGGACGGTTAAAGGAGCTAACAAGTCTTTATCTGGACAGCTCTCAGTTTAACGGCACATTCCCTGATGAAATAGGCAACTTGTCCAATCTTCAAGTCTTGGATATGGCCCAAAACAGAAAACTCGCTCCTTCAAAGTTGCCAGCCAGCTTCACCAGGCTGAAGAATCTGAAGGATTTTCAGATGTATGAGTCTAACCTGATTGGGGAAATCCCAGAAAGCATTGGAGAAATGGTGGCTTTGGAGCACTTGGATATATCGATTAATAGTTTAAGTGGGAACATTCCCAGTGGTTTGTTTACTCTGAAGAATCTAAGCATACTGTTTCTTTCAAGAAATGATCTTTCTGGGGAGCTACCAGAGGTGGTTGAATTATCCAACCTGACCATCCTTGATCTTACACAGAACAATCTCACTGGGAAAATACCTGATGGCCTTGGAAATCTCGTGAAGTTAACTGGTTTAAATTTGGGCTTCAATCACTTTTCAGGTCAGATACCAGAAAGCCTAGGGCGTCTTCCATTTATAATGGATTTTGGTGTTGTTTTCAACAATTTATCAGGTACTCTTCCTCCGGAGTTTGGCCTCCGCTCAAAGCTTAGAAGATTTGAGATTGCGTCAAACAATTTCACAGGAAATCTGCCTCAGAACTTATGCTATAATGGCAATTTATTTCGAATAACAGCTTATGACAACAAACTGAACGGAGAGTTGCCAGAATCGCTGGGAAATTGTAGTAGCCTGATAGAGTTGAGGGTTGATAATAACGAGCTTTCTGGCAACATTCCCAGCGGCCTCTGGGCCTCTCTAAATTTGTCAACTTTAATGATCAACCAAAATAAGTTCACTGGTGAACTTCCTGAGACATTGCCTAGAAATATTTCACGCTTGGCAATTAGTTACAATCAGTTCTCTGGTCGAATTCCAGCAGGAGTATCTTCCATGAGGAATCTGGTGGTGTTCAACGCCAGTAACAACCTCTTCAATGGAAGTATTCCAGAAGAGCTAACGAGTCTTTCCCAGCTGACAGACCTGTTGCTTGATCAGAACCAACTTTCAGGACCACTTCCATCCGACTTTATATCATGGAAGTCTCTGAAAGCTCTAAACCTGAGCCAAAATCAGCTCTCTGGAGAAATCCCAGATGCCATTGGTCGTTTACCTGTGCTCACACAACTAGACTTGTCAGAAAATCAATTCTCTGGCCAAGTTCCGACTCAACTTGGCCATTTGACACTCACCAATCTCAATCTCTCCTCCAATCTTTTGACGGGGAGGATTCCTAGTGAATTGGAAAATCTTGCTTTTGCTGACAGCTTTTTGAACAATCCTGGTCTCTGTGCTGACATGGCAGGACTAAACATTACCTTATGCAATTCTGGTTCTGGCTCCCAAATGTCAAGCAGGGGCTCATCTGTGCCTCTTGCTTTGATCATTAGCCTGGGAGTAATAGCCTGTATAGCCGTTTTCTTGTTGTCAATCTTGATAATCAGAGTATACCAAAAGAGAAAGCAAGAACTGGACACTTTATGGAAGCTGACTTCTTTTCAGAGGCTGAATTTCACAGAATCAAACATCGTATCATCCATGACAGAATATAACATTATAGGCAGAGGCGGGTACGGTACAGTATACCGTGTTGCTATCAATGATATAGGCTATGTTGCTGTGAAGAAGATATGCAGTGACAGAAAGTTAGATCAGAAGCTTGAGAAAGCATTTCTTGCAGAAGTTGAAATTTTGAGCGCTATTCGTCATACAAACATAGTGAAGCTTCTGTGCTGTATATCCAATGAGGATTCTCTGCTTCTTGTTTATGAATATCTGGAAAACCGTAGCCTTGATCGCTGGCTGCACAAGATGATTGGATCATCAGGTGTGTCAGGTTCAGTCCATGATGTTGTTCTTGATTGGCCTAAGAGATTGCATATAGCCATTGGAGCTGCTCAAGGTCTGAGCTATATGCACCATGACTCCTCACCGCCCATTATTCATCGTGATGTGAAAACAAGCAACATTCTTTTGGATTCTCAGTTCAATGCCAAAGTTGCTGACTTTGGTCTGGCCAGGATGTTGATCAAGCCAGGACAACTTGATACCATGTCTGCTGTGCTTGGCTCTTTTGGGTATATTGCACCTGAATATGCTCAAACGAAACGAGTGAACGAGAAGGTTGATGTGTTTAGTTTCGGGGTTATCTTATTGGAACTGACGACAGGGAAAGAAGCAAATTATGGAGATGAACACTCATCTCTTGCAGAATGGGCGTGTCGTCAGATTCAGTTGGGAAGCAACATAGAACAAGTTCTAGACAAAGGGGTGAAGGAACCCATATACTTGGATGAAATGTGCAGTGTGTTCAAACTTGGGGTGATGTGTACAAAAAAAGATCCAGCTGGTAGGCCTTCCATGAAGGAGGTACTCCATATTTTGCTCCAATGGAGGAATCCATCTGCTCATATAGAGAAGAAGAATGTTGGTCACCTTGATGCTGTTCCCCTCTTAAAGAACTCTAAGAGGGAGAGTAGGTTGGATATTGATAATGATAATTAG 3252 0.4237 MTDYPNAVCCLNKIASSMWFVVFGLIAYSMIMILYIFDKVWPCGVSSGMEFFMNSINDVDVSSHTQMTKSTPFSCLQIPSYSLFFFFFLFLSHANSQSELYDQEHAVLLRIKRYLQNPSFLSHWTSSNSSHCSWPEINCTNDSVTKLALINTNITQTIPPFLCELKNLTIIDFQWNYFPGEFPIFLYNCSKLEYLDLSNNYFVGKIPDDIDRLANLSFLNLGGNNFSGDIPASIGRLKELTSLYLDSSQFNGTFPDEIGNLSNLQVLDMAQNRKLAPSKLPASFTRLKNLKDFQMYESNLIGEIPESIGEMVALEHLDISINSLSGNIPSGLFTLKNLSILFLSRNDLSGELPEVVELSNLTILDLTQNNLTGKIPDGLGNLVKLTGLNLGFNHFSGQIPESLGRLPFIMDFGVVFNNLSGTLPPEFGLRSKLRRFEIASNNFTGNLPQNLCYNGNLFRITAYDNKLNGELPESLGNCSSLIELRVDNNELSGNIPSGLWASLNLSTLMINQNKFTGELPETLPRNISRLAISYNQFSGRIPAGVSSMRNLVVFNASNNLFNGSIPEELTSLSQLTDLLLDQNQLSGPLPSDFISWKSLKALNLSQNQLSGEIPDAIGRLPVLTQLDLSENQFSGQVPTQLGHLTLTNLNLSSNLLTGRIPSELENLAFADSFLNNPGLCADMAGLNITLCNSGSGSQMSSRGSSVPLALIISLGVIACIAVFLLSILIIRVYQKRKQELDTLWKLTSFQRLNFTESNIVSSMTEYNIIGRGGYGTVYRVAINDIGYVAVKKICSDRKLDQKLEKAFLAEVEILSAIRHTNIVKLLCCISNEDSLLLVYEYLENRSLDRWLHKMIGSSGVSGSVHDVVLDWPKRLHIAIGAAQGLSYMHHDSSPPIIHRDVKTSNILLDSQFNAKVADFGLARMLIKPGQLDTMSAVLGSFGYIAPEYAQTKRVNEKVDVFSFGVILLELTTGKEANYGDEHSSLAEWACRQIQLGSNIEQVLDKGVKEPIYLDEMCSVFKLGVMCTKKDPAGRPSMKEVLHILLQWRNPSAHIEKKNVGHLDAVPLLKNSKRESRLDIDNDN 1083
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0065 1083 SMART LRR_typ_2 382 406 IPR003591 -
Bisa01g0065 1083 SMART LRR_typ_2 572 595 IPR003591 -
Bisa01g0065 1083 SMART LRR_typ_2 620 644 IPR003591 -
Bisa01g0065 1083 SMART LRR_typ_2 213 237 IPR003591 -
Bisa01g0065 1083 SMART LRR_typ_2 358 381 IPR003591 -
Bisa01g0065 1083 SMART LRR_typ_2 311 335 IPR003591 -
Bisa01g0065 1083 Pfam Leucine rich repeat 183 226 IPR001611 GO:0005515
Bisa01g0065 1083 Pfam Leucine rich repeat 593 633 IPR001611 GO:0005515
Bisa01g0065 1083 ProSitePatterns Serine/Threonine protein kinases active-site signature. 896 908 IPR008271 GO:0004672|GO:0006468
Bisa01g0065 1083 Gene3D Transferase(Phosphotransferase) domain 1 842 1065 - -
Bisa01g0065 1083 FunFam Leucine-rich repeat receptor-like protein kinase TDR 379 693 - -
Bisa01g0065 1083 SUPERFAMILY RNI-like 133 420 - -
Bisa01g0065 1083 FunFam Kinase family with leucine-rich repeat domain-containing protein 842 1060 - -
Bisa01g0065 1083 SMART serkin_6 763 1045 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g0065 1083 SUPERFAMILY Protein kinase-like (PK-like) 752 1044 IPR011009 -
Bisa01g0065 1083 Gene3D Ribonuclease Inhibitor 413 688 IPR032675 -
Bisa01g0065 1083 FunFam Receptor-like protein kinase HSL1 isoform A 101 252 - -
Bisa01g0065 1083 Pfam Leucine Rich Repeat 360 382 IPR001611 GO:0005515
Bisa01g0065 1083 ProSiteProfiles Protein kinase domain profile. 763 1045 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g0065 1083 Pfam Protein kinase domain 765 1042 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g0065 1083 Gene3D Phosphorylase Kinase; domain 1 733 841 - -
Bisa01g0065 1083 Gene3D Ribonuclease Inhibitor 101 275 IPR032675 -
Bisa01g0065 1083 Gene3D Ribonuclease Inhibitor 276 412 IPR032675 -
Bisa01g0065 1083 FunFam Receptor-like protein kinase HSL1 743 841 - -
Bisa01g0065 1083 ProSitePatterns Protein kinases ATP-binding region signature. 769 792 IPR017441 GO:0005524
Bisa01g0065 1083 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 358 1044 - -
Bisa01g0065 1083 SUPERFAMILY L domain-like 332 668 - -
Bisa01g0065 1083 CDD STKc_IRAK 769 1044 - -
Bisa01g0065 1083 Pfam Leucine rich repeat N-terminal domain 103 139 IPR013210 -
Bisa01g0065 1083 FunFam Putative leucine-rich repeat receptor-like protein kinase family protein 257 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0065 Bisa-ChrBisa01 1040336 1048525 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0065 104 1082 Receptor kinase-like Gene Family AT5G25930 50.911 0.0 949
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bisa01g0065 Pkinase 7.9e-49 CL0016