Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0061 ATGGGAAGAGCGACAAGGTGGTTGAAGGGGTTGTTTGGGATGAAGAGAGACAGAGAGAGAAAAGAGAATTCGAACTCCGACCACCGTAGGAACACGACATCATCGGCAGCAGCACCACCCAACGTTTCATCTGCAGAGGCTGCTTGGCTCCAATCATTTTACACAGAAACAGAGAATGAGCAGAACAAGCACGCCATTGCGGTGGCCGCTGCCACCGCCGCAGCAGCCGATGCCGCTGTGGCTGCCGCACAGGCGGCGGTAGCGGTGGTCAGGCTGACCAGCCAAGGCAGAGGCACCATGTTCGGCGGCGGACACGAGAGGTTGGCCGCCGTCAAGATTCAAACAGTATTCAGGGGATTTTTGGCAAGGAAGGCACTGAGAGCCTTAAAAGGATTAGTGAAGTTACAAGCACTTGTGAGAGGATTTCTAGTTCGGAAGCAAGCAACGGCAACGTTACATAGTATGCAAGCTCTTATAAGAGCTCAAGCCACCGTTCGGTCTCATAAAGCTCGTGGTCGTGGGCTCATGAACAAAACCAACGAAGCGTATAGATTCGAAACCCAAGCTCGAAGATCCATGGAGAGATTCGATGAGAGCAGGAGGCTATCGTCTTCTTTCGATGCTACATTCAATAATACTAACAGTATCGATGGAAGCCCAAAGATAGTGGAAGTGGACACAGGTTGCCGGCCGAAATCGAGGTCTCGCCGGAGCAACACGTCAATGTCAGATTTTGGCGATGACCCAGCATTCCAAACGCTGTCTTCTCCATTGCCAATCCCACAGATTCGTACCCCAGCTCAGTTATCAATGGCGGATCGAAGGATGTTGCAGGAGTCGGAGTGGGGGCTAACAGGGGAAGAATGTAGGTTCTCCACAGCACATAGCACTCCACGTTTTGCCAATTCTTGTTCTTGTGGGTCAGTGGCGACGCCGAAGAGCGTGTGTGCGGATAGACTGGTGTGGCAATATGGGAATTTTCCGAATTACATGGCGAATACTCAATCATTCAAGGCGAAATTGAGGTCACGGAGTGCTCCAAAGCAACGGCCAGAAGCAGGAGGAGCGAAGAAGAGGCTTTCGCTGAATGAAATGATGGAGTCAAGGAGTAGCTTGAGTGGGGTTAGAATGCAGAGGTCATGCTCGCAGGTTCAGGACGCCATTAATTTCAAGAATGCTGTGATGGGTAAGCTTGAGAAGTCCAGAGAGTTTGGTAGAGAGAAGGATAGAGATAGTTTCTATTTGCAGAGGAGATGGTGA 1260 0.5087 MGRATRWLKGLFGMKRDRERKENSNSDHRRNTTSSAAAPPNVSSAEAAWLQSFYTETENEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSQGRGTMFGGGHERLAAVKIQTVFRGFLARKALRALKGLVKLQALVRGFLVRKQATATLHSMQALIRAQATVRSHKARGRGLMNKTNEAYRFETQARRSMERFDESRRLSSSFDATFNNTNSIDGSPKIVEVDTGCRPKSRSRRSNTSMSDFGDDPAFQTLSSPLPIPQIRTPAQLSMADRRMLQESEWGLTGEECRFSTAHSTPRFANSCSCGSVATPKSVCADRLVWQYGNFPNYMANTQSFKAKLRSRSAPKQRPEAGGAKKRLSLNEMMESRSSLSGVRMQRSCSQVQDAINFKNAVMGKLEKSREFGREKDRDSFYLQRRW 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0061 419 PANTHER IQ-DOMAIN 5-RELATED 1 367 - -
Bisa01g0061 419 Pfam IQ calmodulin-binding motif 133 147 IPR000048 GO:0005515
Bisa01g0061 419 Pfam IQ calmodulin-binding motif 109 127 IPR000048 GO:0005515
Bisa01g0061 419 ProSiteProfiles IQ motif profile. 106 134 IPR000048 GO:0005515
Bisa01g0061 419 SMART iq_5 105 127 IPR000048 GO:0005515
Bisa01g0061 419 SMART iq_5 128 149 IPR000048 GO:0005515
Bisa01g0061 419 Gene3D - 105 157 - -
Bisa01g0061 419 MobiDBLite consensus disorder prediction 10 28 - -
Bisa01g0061 419 MobiDBLite consensus disorder prediction 217 261 - -
Bisa01g0061 419 MobiDBLite consensus disorder prediction 9 42 - -
Bisa01g0061 419 Pfam Protein of unknown function (DUF4005) 298 383 IPR025064 -
Bisa01g0061 419 ProSiteProfiles IQ motif profile. 130 157 IPR000048 GO:0005515
Bisa01g0061 419 MobiDBLite consensus disorder prediction 234 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0061 Bisa-ChrBisa01 973920 975347 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0061 1 377 IQD Protein Family AT3G16490 52.030 7.06e-91 278