Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0060 ATGTCAAGTTTTCTTCATCATACTTTCTACGTTTTACTACTTCTTCTTCTTCTTCTGCAAAATCCCACTCTAACATTATGCCATACCAAGGGAGTTAGACCGAGACGTTTTGCAGGGACTGGATTATCGATCAATATGACGAGAGTCCAGAATTCAGAACAGCGATTCATGAAATGGGTCAATTTTGTTGGTAGCCTCAAACACTCTGTTTTTAGGACAGCAAAAAACAAGCTTTTTGCATCTTACACTTTGCACGTCGCTAAAAATCCGGCGCTGGGAGATTTTACCACCATTCAAGAAGCCATTGATTCCCTTCCATTGATCAATCTCGTGAGAGTGGTCATCAAGGTCCATGCAGGGGTTTACACGGAGAAAGTAAACATCCCTCCTATGAAATCCTTCATAACCATAGAAGGAGCAGGCGCAGATAGTACCATCGTTCAATGGGGTGACACAGCTCAAACTCCTGGGCCAAGAGGGCAGCCATTGGGAACATATGGTTCTGCAACATTTGGGGTGAATTCACCTTACTTCATTGCCAAGAACATAACTTTCAAAAACACAACCCCAGTTCCTCCACCAGGAGCAGTGGGGAAGCAGGCAGTGGCATTGAGAATTTCAGCAGACACGGCATCATTCGTGGGATGCAAATTCCTAGGGGCACAGGACACACTGTATGATCATGTGGGTAGGCATTATTACAAGGACTGCTACATCGAAGGCTCAGTGGATTTCATATTCGGGAACGCCCTGTCTCTGTTTGAGGGATGTCACGTGCATGCAATAGCACAGAACCTAGGAGCAGTAACAGCACAAGGGAGGAGCAGCATATTGGAGGACACAGGGTTCTCATTTGTGCACTGTAAGGTCACGGGGTCAGGGGCACTATACCTTGGAAGGGCTTGGGGTCCCTTCTCTCGCGTGGTCTTTGCCTACACTTACATGGACAACATCATCATCCCTAAGGGCTGGTATAACTGGGGCGACCCTAACCGTGAAATGACGGTGTATTACGGACAGTACAAATGCACAGGGCCAGGAGCTAGCTTCGCCGGCAGAGTATCATGGTCCAAAGAACTCACCGATGAGGAAGCTAAACCTTTTATTTCACTTACCTTCATTGATGGCTCCGAATGGATCAAATTGTAG 1149 0.4674 MSSFLHHTFYVLLLLLLLLQNPTLTLCHTKGVRPRRFAGTGLSINMTRVQNSEQRFMKWVNFVGSLKHSVFRTAKNKLFASYTLHVAKNPALGDFTTIQEAIDSLPLINLVRVVIKVHAGVYTEKVNIPPMKSFITIEGAGADSTIVQWGDTAQTPGPRGQPLGTYGSATFGVNSPYFIAKNITFKNTTPVPPPGAVGKQAVALRISADTASFVGCKFLGAQDTLYDHVGRHYYKDCYIEGSVDFIFGNALSLFEGCHVHAIAQNLGAVTAQGRSSILEDTGFSFVHCKVTGSGALYLGRAWGPFSRVVFAYTYMDNIIIPKGWYNWGDPNREMTVYYGQYKCTGPGASFAGRVSWSKELTDEEAKPFISLTFIDGSEWIKL 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0060 382 ProSitePatterns Pectinesterase signature 2. 239 248 IPR033131 -
Bisa01g0060 382 SUPERFAMILY Pectin lyase-like 80 381 IPR011050 -
Bisa01g0060 382 FunFam Pectinesterase 80 382 - -
Bisa01g0060 382 Gene3D - 79 382 IPR012334 -
Bisa01g0060 382 Pfam Pectinesterase 91 376 IPR000070 GO:0030599|GO:0042545
Bisa01g0060 382 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 74 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0060 Bisa-ChrBisa01 954164 956448 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0060 1 380 Carbohydrate Esterase AT5G47500 42.782 5.92e-103 306